Return to main results Retrieve Phyre Job Id

Job DescriptionP64474
Confidence9.87%DateThu Jan 5 12:08:43 GMT 2012
Rank84Aligned Residues18
% Identity39%Templatec2c7mA_
PDB info PDB header:protein-bindingChain: A: PDB Molecule:rab guanine nucleotide exchange factor 1; PDBTitle: human rabex-5 residues 1-74 in complex with ubiquitin
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.. .......30.
Predicted Secondary structure 


....






Query SS confidence 








. . . .








Query Sequence  CRGICQSDE. . . . RGFCRGCFR
Query Conservation 

 

  
 ....   
 

 
Alig confidence 








....








Template Conservation 
  



 
       



 
Template Sequence  CKKGCGYYGNPAWQGFCSKCWR
Template Known Secondary structure 
TT

SSB

GGGTT

Template Predicted Secondary structure 














Template SS confidence 





















   20.........30.........40.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions