 |
Job Description | P75779 | Confidence | 47.11% | Date | Thu Jan 5 12:14:02 GMT 2012 |
Rank | 48 | Aligned Residues | 71 |
% Identity | 13% | Template | d1sfna_ |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| YlbA-like
|
Resolution | 2.46 |
|
 |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | F | N | R | Y | Q | N | N | E | T | Y | G | F | H | V | D | G | A | V | R | S | H | P | Q | N | G | W | M | R | T | D | L | S | A | T | L | F | L | S | D | P | Q | S | Y | D | G | G | E | L | V | V | N | D | T | F | G | Q | H | R | V | K | L | P | A | G | D | L | V | L | Y | P | S | S | S | L | H | C | V | T |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   | . | . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
V | S | T | M | S | F | A | P | G | A | S | L | P | Y | A | E | V | H | Y | M | E | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | L | M | L | E | . |
. |
. |
. |
. |
. |
. |
G | E | G | L | Y | K | L | E | E | N | . |
. |
Y | Y | P | V | T | A | G | D | I | I | W | M | G | A | H | C | P | Q | W | Y | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T |
| B |
| S | S |
| B |
|
| S | S |
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | . |
|  |  |  |  |  |  | T | T |  | . | . |  |  |  |  |  | T | T |
|  |  |  |  |
| T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|  | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1167 | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | 1190 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 1200 | . | . | . | . | |
|
. | . | . | . | . | 1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . |
  |
  |   |
162 | . | . | . | . | |
. | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
| . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
P | V | T | R | G | . |
V | R | V | A | S | F | M |
Query Conservation |   |
|
|
|   |
| . |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
A | L | G | R | N | W | S | K | Y | L | L | Y | K |
Template Known Secondary structure |   |
 |  | S | S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1226 | . | . | . | 1230 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|