Job Description P75779 Confidence 98.56% Date Thu Jan 5 12:14:02 GMT 2012 Rank 12 Aligned Residues 146 % Identity 15% Template c3thtB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:alkylated dna repair protein alkb homolog 8; PDBTitle: crystal structure and rna binding properties of the rrm/alkb domains2 in human abh8, an enzyme catalyzing trna hypermodification, northeast3 structural genomics consortium target hr5601b Resolution 3.01 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	H	I	P	G	V	L	S	P	Q	D	V	A	R	F	R	E	Q	L	E	Q	A	E	W	V	D	G	R	V	T	T	G	A	Q	G	A	Q	V	K	N	N	Q	Q	V	D	T	R	S	T	L	Y	A	A	L	Q	N	E	V	L	N	A	V	N	Q	H	A	L	F	F	A	A	A	L	P	R	T	L	S	T
Query Conservation
Alig confidence																							.	.	.																					.																		.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.																					.																		.	.	.	.	.	.	.	.	.
Template Sequence		L	M	V	V	E	E	I	I	S	S	E	E	E	K	M	L	L	E	S	V	D	.	.	.	W	R	R	V	K	H	F	G	Y	E	F	N	V	D	K	D	K	P	L	S	.	G	G	L	P	D	I	C	E	S	F	L	E	K	W	L	R	K	.	.	.	.	.	.	.	.	.	G	Y	I	K	H	K	P	D	Q
Template Known Secondary structure						T	T		S											T			.	.	.								S	B							S	S		B		.	S		S															.	.	.	.	.	.	.	.	.	T	S		S	S			S
Template Predicted Secondary structure																							.	.	.																					.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.
Predicted Secondary structure																																																												.																.	.	.	.
Query SS confidence																																																												.																.	.	.	.
Query Sequence		P	L	F	N	R	Y	Q	N	N	E	T	Y	G	F	H	V	D	G	A	V	R	S	H	P	Q	N	G	W	M	R	T	D	L	S	A	T	L	F	L	S	D	P	Q	S	Y	D	G	G	E	L	V	V	N	D	T	F	G	Q	.	H	R	V	K	L	P	A	G	D	L	V	L	Y	P	S	.	.	.	.	S	S
Query Conservation																																																												.																.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.															.	.	.	.	.														.																.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		M	T	I	N	Q	Y	E	P	G	Q	G	I	P	A	H	I	D	T	.	.	.	.	.	.	.	.	H	S	A	F	E	D	E	I	V	S	L	S	L	G	.	.	.	.	.	S	E	I	V	M	D	F	K	H	P	D	G	I	A	V	P	V	M	L	P	R	R	S	L	L	V	M	T	G	E	S	R	Y	L	W
Template Known Secondary structure									T	T										.	.	.	.	.	.	.	.	T	T	T											S	.	.	.	.	.	S									T	T	S									T	T												T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.									.	.	.	.	.	.	.	.	250	.	.	.	.	.						.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		157	.	.	160	.	.																								.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	C	V	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	R	G	V	R	V	A	S	F	M
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	H	G	I	T	C	R	K	F	D	T	V	Q	A	L	K	S	G	I	I	T	S	D	V	G	D	L	T	L	S	K	R	G	L	R	T	S	F	T	F
Template Known Secondary structure									S									S					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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