Job Description P75779 Confidence 99.90% Date Thu Jan 5 12:14:02 GMT 2012 Rank 4 Aligned Residues 161 % Identity 16% Template c3ouiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:egl nine homolog 1; PDBTitle: phd2-r717 with 40787422 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.																			.
Query SS confidence																																																			.	.																			.
Query Sequence		M	Y	H	I	P	G	V	L	S	P	Q	D	V	A	R	F	R	E	Q	L	E	Q	A	E	W	V	D	G	R	V	T	T	G	A	Q	G	A	Q	V	K	N	N	Q	Q	V	D	T	R	S	.	.	T	L	Y	A	A	L	Q	N	E	V	L	N	A	V	N	Q	H	A	.	L	F	F	A	A	A	L	P	R	T
Query Conservation																																																			.	.																			.
Alig confidence																									.																										.	.																			.
Template Conservation																									.
Template Sequence		I	C	V	V	D	D	F	L	G	K	E	T	G	Q	Q	I	G	D	E	V	R	A	L	.	H	D	T	G	K	F	T	D	G	Q	D	I	R	G	D	K	I	T	W	I	E	G	K	E	P	G	C	E	T	I	G	L	L	M	S	S	M	D	D	L	I	R	H	C	N	G	K	L	G	S	Y	K	I	N	G	R
Template Known Secondary structure						S	S	S	S																.			T	T									B									S		S	T	T																				T	S	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																			.	.													.	.
Query SS confidence																																																			.	.													.	.
Query Sequence		L	S	T	P	L	F	N	R	Y	Q	N	N	E	T	Y	G	F	H	V	D	G	A	V	R	S	H	P	Q	N	G	W	M	R	T	D	L	S	A	T	L	F	L	S	D	P	Q	S	Y	D	.	.	G	G	E	L	V	V	N	D	T	F	G	Q	.	.	H	R	V	K	L	P	A	G	D	L	V	L	Y	P	S
Query Conservation																																																			.	.													.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																		.	.													.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	A	M	V	A	C	Y	P	G	N	G	T	G	Y	V	R	H	V	D	N	.	.	.	.	.	.	.	.	.	.	.	P	R	C	V	T	C	I	Y	Y	L	N	K	D	W	D	A	K	V	S	G	G	I	L	R	I	F	P	E	G	K	A	Q	F	A	D	I	E	P	K	F	D	R	L	L	F	F	W	S
Template Known Secondary structure											S	T	T								S		.	.	.	.	.	.	.	.	.	.	.											B	T	T							B								T	T		S	S							B	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.												.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
				155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	S	S	L	H	C	V	T	P	V	T	R	G	V	R	V	A	S	F	M	W	I
Query Conservation		.	.
Alig confidence		.	.										.
Template Conservation													.
Template Sequence		D	R	R	N	P	H	E	V	Q	P	A	.	Y	A	T	R	Y	A	I	T	V	W	Y
Template Known Secondary structure		S	T	T									.	S	S
Template Predicted Secondary structure													.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions