Job Description P75779 Confidence 99.61% Date Thu Jan 5 12:14:02 GMT 2012 Rank 6 Aligned Residues 164 % Identity 13% Template c3kt4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pkhd-type hydroxylase tpa1; PDBTitle: crystal structure of tpa1 from saccharomyces cerevisiae, a2 component of the messenger ribonucleoprotein complex Resolution 2.73 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																														.																														.
Query SS confidence																					.																														.																														.
Query Sequence		Y	H	I	P	G	V	L	S	P	Q	D	V	A	R	F	R	E	Q	L	.	E	Q	A	E	W	V	D	G	R	V	T	T	G	A	Q	G	A	Q	V	K	N	N	Q	Q	V	D	T	R	S	.	T	L	Y	A	A	L	Q	N	E	V	L	N	A	V	N	Q	H	A	L	F	F	A	A	A	L	P	R	T	L	.
Query Conservation																					.																														.																														.
Alig confidence																					.																														.																														.
Template Conservation
Template Sequence		G	T	I	H	E	L	V	N	D	D	L	L	R	A	V	R	K	E	I	E	T	E	I	H	F	T	K	K	E	T	D	I	Y	R	V	N	Q	S	G	S	G	L	D	W	D	D	L	S	R	L	P	N	L	F	K	L	R	Q	I	L	Y	S	K	Q	Y	R	D	F	F	G	Y	V	T	K	A	G	K	L	S	G
Template Known Secondary structure					S	S		B																								S	S												T	T			T	T													S											T	T						S
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.
Predicted Secondary structure		.	.																																										.	.	.								.												.	.	.	.	.	.	.	.
Query SS confidence		.	.																																										.	.	.								.												.	.	.	.	.	.	.	.
Query Sequence		.	.	S	T	P	L	F	N	R	Y	Q	N	N	E	T	Y	G	F	H	V	D	G	A	V	R	S	H	P	Q	N	G	W	M	R	T	D	L	S	A	T	L	F	L	.	.	.	S	D	P	Q	S	Y	D	.	G	G	E	L	V	V	N	D	T	F	G	.	.	.	.	.	.	.	.	Q	H	R	V	K	L	P
Query Conservation		.	.																																										.	.	.								.												.	.	.	.	.	.	.	.
Alig confidence		.	.																								.	.	.	.	.	.	.	.	.										.	.	.								.												.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.
Template Sequence		S	K	T	D	X	S	I	N	T	Y	T	K	G	C	H	L	L	T	H	D	D	V	I	G	S	.	.	.	.	.	.	.	.	.	R	R	I	S	F	I	L	Y	L	P	D	P	D	R	K	W	K	S	H	Y	G	G	G	L	R	L	F	P	S	I	L	P	N	V	P	H	S	D	P	S	A	K	L	V	P	Q
Template Known Secondary structure		S											T	T											T	T	.	.	.	.	.	.	.	.	.										S		T	T	S				G	G	G	B											T	T				S	S		S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.										.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		146	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.
Predicted Secondary structure									.	.	.																.
Query SS confidence									.	.	.																.
Query Sequence		A	G	D	L	V	L	Y	.	.	.	P	S	S	S	L	H	C	V	T	P	V	T	R	G	V	.	R	V	A	S	F	M	W	I
Query Conservation									.	.	.																.
Alig confidence									.	.	.																.
Template Conservation
Template Sequence		F	N	Q	I	A	F	F	K	V	L	P	G	F	S	F	H	D	V	E	E	V	K	V	D	K	H	R	L	S	I	Q	G	W	Y
Template Known Secondary structure		T	T									T	T	T								B		S	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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