Job Description P75779 Confidence 31.56% Date Thu Jan 5 12:14:02 GMT 2012 Rank 61 Aligned Residues 58 % Identity 21% Template c2fqpD_ PDB info PDB header:metal binding protein Chain: D: PDB Molecule:hypothetical protein bp2299; PDBTitle: crystal structure of a cupin domain (bp2299) from bordetella pertussis2 tohama i at 1.80 a resolution Resolution 1.80 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	Y	Q	N	N	E	T	Y	G	F	H	V	D	G	A	V	R	S	H	P	Q	N	G	W	M	R	T	D	L	S	A	T	L	F	L	S	D	P	Q	S	Y	D	G	G	E	L	V	V	N	D	T	F	G	Q	H	R	V	K	L	P	A	G	D	L	V	L	Y	P	S	S	S	L	H	C	V	T
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		W	R	F	P	P	G	G	E	T	G	W	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	X	D	Y	V	V	V	P	X	T	.	.	.	.	.	.	T	G	P	L	L	L	E	T	P	E	G	S	V	T	S	Q	L	T	R	G	V	S	Y	T	R	P	E	G	V	E	H	N	V	I
Template Known Secondary structure						T	T		B			S			.	.	.	.	.	.	.	.	.	.	.	.	.			S							S	S	.	.	.	.	.	.									T	T									T	T							T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.														.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions