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Job DescriptionP11875
Confidence100.00%DateThu Jan 5 11:32:57 GMT 2012
Rank17Aligned Residues262
% Identity18%Templated2d5ba2
SCOP infoAdenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  KQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEMELADLEG
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Template Sequence  EKVFYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAGEDP. . . . . . . . . . . . . .
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TT


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   2.......10.........20.........30.........40.........50.........60.......
 
   192.......200.........210.........220.........230.........240.........250.........260.........270.
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Query Sequence  FYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVAD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKK
Template Known Secondary structure  .....................................TT


STTS
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   68.70.........80.........90.........100.........110
 
   272.......
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Query Sequence  LKAKGLAV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VYEAGDIYYGEYEGLYCVSCERFYTEKELVEGLCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQENPDLIRPEGYRNEV
Template Known Secondary structure  TT
TTTT

TTTSBTTB
TTT
SB

GGGGT
TTSS
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   111........120.........130.........140.........150.........160.........170.........180.........190
 
   280........ .290.........300.........310.........320.........330.........340.........
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Query Sequence  . . . . . . . ESEGATVVF. . . LDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAW
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Template Sequence  LAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTFVWFDALLNYVSALDYPEGEAYRT. FWPHAWHLIGKDILKPHAVFW
Template Known Secondary structure  TS




TTT

SS
TT
TTTTTTT
.GGGGGGT
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   191........200.........210.........220.........230.........240........ .250.........260.........
 
   350.........360.........370.........380.........390.........400.........410.........420........
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Query Sequence  . AIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGA
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Template Sequence  PTMLKAAGIPMYRHLNVG. . . GFLLGPDGRKMSKTLGNVVDPFALLEK. . . . . . . . . . . . . . . . . . . . . . . . . . . YGRDA
Template Known Secondary structure  T



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   270.........280....... ..290.........300.........310.... .....
 
   429430........ .440.........450.....
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Query Sequence  VKYADLSKNR. TTDYIFDWDNMLAFEGN
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Template Sequence  LRYYLLREIPYGQDTPVSEEALRTRYEA
Template Known Secondary structure  S
TTS


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   320.........330.........340.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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