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Job DescriptionP11875
Confidence100.00%DateThu Jan 5 11:32:57 GMT 2012
Rank16Aligned Residues264
% Identity16%Templated1pfva2
SCOP infoAdenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  QTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEMELADLEGF
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Template Sequence  KKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITP. . . . . . . . . . . . . . .
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BTTS

BTT
B

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   5....10.........20.........30.........40.........50.........60.........
 
   193......200.........210.........220.........230.........240.........250.........260.........270..
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Query Sequence  YRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRL
Template Known Secondary structure  ....................................TT


SSSS
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   70.........80.........90.........100.........110...
 
   273......280.......
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Query Sequence  KAKGLAVESEGATVV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KENGFIKNRTISQLYDPEKGMFLPDRFVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQ
Template Known Secondary structure  TT
TTTT

TT


S




GGGGTTS
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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   288.290.........300.........310.........320....... ..330.........340.........350..
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Query Sequence  . . . . . . FLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYET. . . . . . . . . LHADRVLYYIDSRQHQHLMQAWAIV
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Template Conservation      
     
   
           
    
                             
   
 
            
Template Sequence  WDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAM
Template Known Secondary structure 
SS
SS
B
TT
TT
T
SSBTT

SGGGT
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   229230.........240.........250.........260.........270.........280.........290.........300........
 
   353......360.........370.........380.........390.........400.........410.........420.........430..
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Query Sequence  RKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYA
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Template Sequence  LEGSNFRKPSNLFVHGYVTV. . . NGAKMSKSRGTFIKASTWLNH. . . . . . . . . . . . . . . . . . . . . . . . . . . FDADSLRYY
Template Known Secondary structure  TTB


S

...TTBS

TTTT


B...........................S
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   309310.........320........ .330.........340......... 350........
 
   433..... .440.........450.......
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Query Sequence  DLSKNR. . TTDYIFDWDNMLAFEGNTA
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Template Sequence  YTAKLSSRIDDIDLNLEDFVQRVNADI
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T
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   359360.........370.........380.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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