Return to main results Retrieve Phyre Job Id

Job DescriptionP11875
Confidence100.00%DateThu Jan 5 11:32:57 GMT 2012
Rank24Aligned Residues279
% Identity15%Templated1irxa2
SCOP infoAdenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.........140.........150.........160.........170.........180........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  TPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEMELAD
Query Conservation        
 

  











 
 

 

 


 

  
  
     


 
 

   
        
         
Alig confidence 









.













































.....

















Template Conservation         
  . 
  


 






 

  
 


 

  
  
     


 
  ..... 

               
Template Sequence  RGEKEKYVVE. SGITPSGYVHVGNFRELFTAYIVGHALRDKGYEVRHIHMWDDYDRF. . . . . RKVPRNVPQEWKDYLGMP
Template Known Secondary structure  S


S.

SS


TTT

TTSB
.....



SSS
GGGGGGTTSB
Template Predicted Secondary structure 




.




















.....



Template SS confidence 















































































   16...20..... ....30.........40.........50.........60.........70. ........80.........
 
   189190.........200.........210.........220. ........230.........240.........250....
Predicted Secondary structure 







..............





Query SS confidence 
































. . . . . . . . . . . . . .
































Query Sequence  LEGFYRDAKKHYDEDEEFAERARNYVVKLQSGD. . . . . . . . . . . . . . EYFREMWRKLVDITMTQNQITYDRLNVTLTRDD
Query Conservation      
                       

   ..............                          
      
Alig confidence 
































..............
































Template Conservation                           
  
 
  
                    
                         
Template Sequence  ISEVPDPWGCHESYAEHFMRKFEEEVEKLGIEVDLLYASELYKRGEYSEEIRLAFEKRDKIMEILNKYREIAKQPPLPEN
Template Known Secondary structure  GGGS

TTSSSSSTTT


TTTTTTT




TT
Template Predicted Secondary structure 



























Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   255....260.........270.........280.........290.........300.........310.........320.........330....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  VMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
Query Conservation     
             
         


                
 

 



   
   


    
      
  
Alig confidence 











......



















....




















.
.....









Template Conservation              ......                    ....            
 
 


  . .....         
Template Sequence  WWPAMVYCPEHR. . . . . . REAEIIEWDGGWKVKYKCPE. . . . GHEGWVDIRSGNVKLRWRVDW. P. . . . . MRWSHFGVDF
Template Known Secondary structure 

S
TTT
......


SSS


SS....S



TTSS

......S


B
Template Predicted Secondary structure 







......










....




















......



Template SS confidence 















































































   170.........180. ........190.........200. ........210.........220.. . ......230...
 
   335....340.........350.. .......360.........370.........380.........390.........400.........410..
Predicted Secondary structure 






..

























Query SS confidence 

















. .



























































Query Sequence  YYIDSRQHQHLMQAWAIV. . RKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDM
Query Conservation   
 
 
           
..  

         
     
   

 




 

 
 
 


 
                
Alig confidence 

















..















..........

















................
Template Conservation 

 
 

                             ..........



  
  

  


  ................
Template Sequence  EPAGKDHLVAGSSYDTGKEIIKEVYGKEAPLSLMYE. . . . . . . . . . FVGIKGQNVILLSDLYEV. . . . . . . . . . . . . . . .
Template Known Secondary structure 

STTS




B


..........
S





TT................
Template Predicted Secondary structure 















..........





................
Template SS confidence 















































































   234.....240.........250.........260......... 270.........280.......
 
   413......420.........430.........440......
Predicted Secondary structure 













Query SS confidence 

































Query Sequence  PADELEKLANAVGIGAVKYADLSKNRTTDYIFDW
Query Conservation             

 




  
         

 
Alig confidence  ...........






















Template Conservation  ...........   

 
           
 


Template Sequence  . . . . . . . . . . . LEPGLVRFIYARHRPNKEIKIDL
Template Known Secondary structure  ...........S
SS
TTS


Template Predicted Secondary structure  ...........












Template SS confidence 

































   297..300.........310.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions