Job Description P11875 Confidence 100.00% Date Thu Jan 5 11:32:57 GMT 2012 Rank 6 Aligned Residues 330 % Identity 25% Template d1iq0a2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 2.30

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		T	P	E	K	Q	T	I	V	V	D	Y	S	A	P	N	V	A	K	E	M	H	V	G	H	L	R	S	T	I	I	G	D	A	A	V	R	T	L	E	F	L	G	H	K	V	I	R	A	N	H	V	G	D	W	G	T	Q	F	G	M	L	I	A	W	L	E	K	Q	Q	.	Q	E	N	A	G	E	M	E	L	A
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		P	R	R	P	G	V	V	L	V	E	H	T	S	V	N	P	N	K	E	L	H	V	G	H	L	R	N	I	A	L	G	D	A	I	A	R	I	L	A	Y	A	G	R	E	V	L	V	L	N	Y	I	D	D	T	G	R	Q	A	A	E	T	L	F	A	L	R	H	Y	G	L	T	W	D	G	K	E	K	Y	D	H
Template Known Secondary structure																	T	T	S			B																				T	T											T	T	S													T	T					S	S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	E	G	F	Y	R	D	A	K	K	H	Y	D	E	D	E	E	F	A	E	R	A	R	N	Y	V	V	K	L	Q	S	G	D	E	Y	F	R	E	M	W	R	K	L	V	D	I	T	M	T	Q	N	Q	I	T	Y	D	R	L	N	V	T	L	T	R	D	D	V	M	G	E	S	L	Y	N	P	M	L	P	G
Query Conservation
Alig confidence													.																							.	.	.	.	.	.
Template Conservation													.																							.	.	.	.	.	.
Template Sequence		F	A	G	R	A	Y	V	R	L	H	Q	.	D	P	E	Y	E	R	L	Q	P	A	I	E	E	V	L	H	A	L	E	R	G	E	.	.	.	.	.	.	L	R	E	E	V	N	R	I	L	L	A	Q	M	A	T	M	H	A	L	N	A	R	Y	D	L	L	V	W	E	S	D	I	V	R	A	G	L	L	Q	K
Template Known Secondary structure													.		T	T	T	G	G	G													T	T	T	.	.	.	.	.	.	T																		T	T				S											T	T
Template Predicted Secondary structure													.																							.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	A	D	L	K	A	K	G	L	A	V	E	S	E	G	.	.	.	.	.	A	T	V	V	F	L	D	E	F	K	N	K	E	G	E	P	M	G	V	I	I	Q	K	K	D	G	G	Y	L	Y	T	T	T	D	I	A	C	A	K	Y	R	Y	E	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.									.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.
Template Sequence		A	L	A	L	L	E	Q	S	P	H	V	F	R	P	R	E	G	K	Y	A	G	A	L	V	M	D	A	S	P	.	V	I	P	G	L	E	D	P	F	F	V	L	L	R	S	N	G	T	A	T	Y	Y	A	K	D	I	A	F	Q	F	W	K	M	G	I	L	E	G	L	R	F	R	P	Y	E	N	P	Y	Y	P
Template Known Secondary structure							T	T	S	T	T					S	S	S	T	T	T	T							T	T	.	T	S		S		S									T	T	S		B														T	T	S	S											S	S		T
Template Predicted Secondary structure																															.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
																329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	D	R	V	L	Y	Y	I	D	S	R	Q	H	Q	H	L	M	Q	A	W	A	I	V	R	K	A	G	Y	V	P	E	S	V	P	L	E	H	H	M	F	G	M	M	L	G	K	D	G	K	P	F	K	T	R	A	G	G	T	V	K	L	A	D	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		G	L	R	T	S	A	P	E	G	E	A	Y	T	P	K	A	E	E	T	I	N	V	V	D	V	R	Q	S	H	P	Q	A	L	V	R	A	A	L	A	L	A	G	Y	P	A	L	A	E	K	A	H	H	L	A	Y	E	T	V	.	.	.	.	.	L	L	E	G	R	Q	M	S	G	A	V	S	V	D	E	V	L
Template Known Secondary structure		T																S								S	S	S														T	T						T	T										.	.	.	.	.			T	T	B		S					B
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.						.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	L	E	R	A	R	R	L	V	A	E	K	N	P	D	M	P	A	D	E	L	E	K	L	A	N	A	V	G	I	G	A	V	K	Y	A	D	L	S	K	N	R	T	T	D	Y	I	F	D	W	D	N	M	L	A	F	E
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		E	E	A	T	R	R	A	R	A	I	V	E	E	K	N	P	D	.	.	H	P	D	K	E	E	A	A	R	M	V	A	L	G	A	I	R	F	S	M	V	K	T	E	P	K	K	Q	I	D	F	R	Y	Q	E	A	L	S	F	E
Template Known Secondary structure																	T	T	.	.		S																					S		T	T	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.			.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions