Return to main results Retrieve Phyre Job Id

Job DescriptionP11875
Confidence100.00%DateThu Jan 5 11:32:57 GMT 2012
Rank5Aligned Residues338
% Identity33%Templated1f7ua2
SCOP infoAdenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   107..110.........120.........130.........140.........150.........160.........170.........180 .....
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Query Sequence  VATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQEN. AGEME
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Template Sequence  CKLVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDP
Template Known Secondary structure 


SS





BTTS

BGGGTT
B

S


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   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   186...190.........200.. .......210.........220.........230.........240.........250........
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Query Sequence  LADLEGFYRDAKKHYDE. . . . . . . DEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGE
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Template Sequence  IHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQ
Template Known Secondary structure  STTSS
SST
TT


SGGG
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   217..220.........230.........240.........250.........260.........270.........280.........290......
 
   259260.........270.........280.........290.........300.........310.........320.........330........
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Query Sequence  SLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYID
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Template Sequence  VSKES. MLKAIDLFKEKGLTHEDKGAVLIDLTKFN. . . KKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIA
Template Known Secondary structure 

.TT
TTGGGT
...TTT

TTS




S

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   297..300. ........310.........320.........330 .........340.........350.........360.........370..
 
   339340.........350.........360.........370.........380.........390.........400.........410 .......
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Query Sequence  SRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNP. DMPADEL
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Template Sequence  SQQDLHAAQFFEILKQMGF. EWAKDLQHVNFGMV. . . . . QGMSTRKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEHP
Template Known Secondary structure  GGGTT
.GGGGG



.....S

GGGT


BT
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   373......380.........390. ........400..... ....410.........420.........430.........440......
 
   418.420.........430.........440.........450....
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Query Sequence  EKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEG
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Template Sequence  EEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEG
Template Known Secondary structure  SS
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   447..450.........460.........470.........480...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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