Job Description P11875 Confidence 97.57% Date Thu Jan 5 11:32:57 GMT 2012 Rank 63 Aligned Residues 189 % Identity 13% Template c3p0jD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: leishmania major tyrosyl-trna synthetase in complex with tyrosinol,2 triclinic crystal form 1 Resolution 2.89 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	K	E	M	H	V	G	H	L	R	S	T	I	I	G	D	A	A	V	R	T	L	E	F	L	G	H	K	V	I	R	A	N	H	V	G	D	W	G	T	Q	F	G	M	L	I	A	W	L	E	K	Q	Q	Q	E	N	A	G	E	M	E	L	A	D	L	E	G	F	Y	R	D	A	K	K	H	Y	D	E	D
Query Conservation
Alig confidence																		.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	G	R	M	H	I	A	Q	G	I	F	K	A	V	N	.	.	V	N	K	C	T	A	A	.	G	C	E	F	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	V	A	D	W	F	A	L	M	N	D	K	V	G	G	E
Template Known Secondary structure				S	S		B											.	.								.	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T		S	T	T
Template Predicted Secondary structure																		.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.		.	.	.	.	.	.																																	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		E	E	F	A	E	R	A	R	N	Y	V	V	K	L	Q	S	G	D	E	Y	F	R	E	M	W	R	K	L	V	D	I	T	M	T	Q	N	Q	I	T	Y	D	R	L	N	V	T	L	T	R	D	D	V	M	G	E	S	L	Y	.	.	.	.	N	P	M	L	P	G	I	V	A	D	L	K	A	K	G	L	A	V
Query Conservation																																																												.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	K	I	R	I	V	G	R	Y	L	I	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	K	A	A	G	M	D	M	D	K	V	L	F	L	W	S	S	E	E	I	T	S	H	A	D	T	Y	W	R	M	V	L	D	I	G	R	Q	N	T	I	A
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T			G	G	G												T	T														T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.																										100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	E	G	A	T	V	V	F	L	D	E	F	K	N	K	E	G	E	P	M	G	V	I	I	Q	K	K	D	G	G	Y	L	Y	T	T	T	D	I	A	C	A	K	Y	R	Y	E	T	L	H	A	D	R	V	L	Y	Y	I	D	S	R	Q	H	Q	H	L	M	Q	A	W	A	I	V	R	K	A	G	Y	V	P
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Sequence		R	I	K	K	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	T	I	M	G	K	T	E	G	T	L	T	A	A	Q	V	L	Y	P	L	M	Q	C	C	D	I	F	F	L	K	A	D	.	.	I	C	Q	L	G	L	D	Q	R	K	V	N	M	L	A	R	E	Y	C	D	L	I	G	R	K	L
Template Known Secondary structure					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	S			S	S			S	S		S													T	T		S	.	.					B	G	G	G															T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
		141	.	.	.	.																.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.		.	.	.	.	.	390	.	.
Predicted Secondary structure																				.	.								.
Query SS confidence																				.	.								.
Query Sequence		E	S	V	P	L	E	H	H	M	F	G	M	M	L	G	K	D	G	.	.	K	P	F	K	T	R	A	.	G	G	T	V	K	L	A	D
Query Conservation																				.	.								.
Alig confidence									.	.	.									.	.								.
Template Conservation									.	.	.
Template Sequence		K	P	V	I	L	S	H	.	.	.	H	M	L	A	G	L	K	Q	G	Q	A	K	M	S	K	S	D	P	D	S	A	I	F	M	E	D
Template Known Secondary structure								B	.	.	.						S	S	T	T		S	S			S	S		G	G	G	S		B	T	T
Template Predicted Secondary structure									.	.	.
Template SS confidence
		204	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions