Job Description P11875 Confidence 43.66% Date Thu Jan 5 11:32:57 GMT 2012 Rank 108 Aligned Residues 60 % Identity 18% Template c3mcaB_ PDB info PDB header:translation regulation/hydrolase Chain: B: PDB Molecule:protein dom34; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay Resolution 2.74 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	A	E	Q	V	L	T	H	L	D	L	N	G	I	A	S	K	V	E	I	A	G	P	G	F	I	N	I	F	L	D	P	A	F	L	A	E	H	V	Q	Q	A	L	A	S	D	R	L	G	V	A	T	P	E	K	Q	T	I	V	V	D	Y	S	A
Query Conservation
Alig confidence																	.													.	.	.	.	.
Template Conservation																	.													.	.	.	.	.
Template Sequence		D	S	V	F	Q	S	I	N	S	E	F	D	F	D	K	.	L	K	V	V	I	L	A	S	P	G	F	V	.	.	.	.	.	A	R	G	L	Y	D	Y	I	F	S	M	A	V	K	L	D	L	K	Q	I	V	K	S	K	N	K	F	V	I	L	H	S	S
Template Known Secondary structure														T	T	T	.		S							S	S	S		.	.	.	.	.															T	T								G	G	G							S
Template Predicted Secondary structure																	.													.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions