Job Description P11875 Confidence 67.47% Date Thu Jan 5 11:32:57 GMT 2012 Rank 99 Aligned Residues 62 % Identity 11% Template c2vgmA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:dom34; PDBTitle: structure of yeast dom34 : a protein related to translation2 termination factor erf1 and involved in no-go decay. Resolution 2.6 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	A	E	Q	V	L	T	H	L	D	L	N	G	I	A	S	K	V	E	I	A	G	P	G	F	I	N	I	F	L	D	P	A	F	L	A	E	H	V	Q	Q	A	L	A	S	D	R	L	G	V	A	T	P	E	K	Q	T	I	V	V	D	Y	S	A	P	N
Query Conservation
Alig confidence																	.													.	.	.	.	.
Template Conservation																	.													.	.	.	.	.
Template Sequence		K	A	I	Y	S	A	M	K	K	D	L	N	F	D	K	.	L	K	T	I	I	L	C	S	P	G	F	Y	.	.	.	.	.	A	K	I	L	M	D	K	I	F	Q	Y	A	E	E	E	H	N	K	K	I	L	D	N	K	G	M	F	F	I	A	H	C	S	T	G
Template Known Secondary structure														T	T	T	.		S							S	S	T		.	.	.	.	.																T						T	T	T	T	S							S		T
Template Predicted Secondary structure																	.													.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions