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Job DescriptionP11875
Confidence99.89%DateThu Jan 5 11:32:57 GMT 2012
Rank40Aligned Residues304
% Identity17%Templatec2ja2A_
PDB info PDB header:ligaseChain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: mycobacterium tuberculosis glutamyl-trna synthetase
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEMELADLE
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Template Sequence  ATETVRVRF. CPSPTGTPHVGLVRTALFNWAYAR. . . . . HTGGTFVFRIEDTDA. . . . . . . . . . . . . . QRDSEESYLALL
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SSSS
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Query Sequence  GFYRDAKKHYDEDE. . . . . . . . . . . . EFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGE
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Template Sequence  DALRWLGLDWDEGPEVGGPYGPYRQSQRAEIYRDVLARLLAAGEAYH. . . AFSTPEEVEARHVAAGRNPKLG. . . . . . YD
Template Known Secondary structure  T


SBBTTTB
TT


BGGG
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Query Sequence  SLYNPMLPGIVADLKAKGLAV. . . . . . ESEGATVVFLDEFKNKEGEPM. . GVIIQKKDGGYLYTTTDIACAKYRYETLHA
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Template Sequence  NFDRHLTDAQRAAYLAEGRQPVVRLRMPDDDLAWNDLVRGPVTFAAGSVPDFALTRASGDPLYTLVNPCDDAL. . . . MKI
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GGGG

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TTT
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BSB
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Query Sequence  DRVLYYIDSRQHQHLMQAWAIVRKA. . . GYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAE
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Template Sequence  THVLR. . GEDLLPSTPRQLALHQALIRIGVAERIPKFAH. . LPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLA
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..GGGGGGTTS




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TTSGGGBT

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   210.... .....220.........230.........240...... ...250.........260.........270.........280.....
 
   408.410.........420.........430.........440.........450....
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Query Sequence  KNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEG
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Template Sequence  LLGWSIADDHDLFGLD. . . EMVAAFDVADVNSSPARFDQKKADALNA
Template Known Secondary structure  TSS

S
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GGG


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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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