Job Description P11875 Confidence 99.89% Date Thu Jan 5 11:32:57 GMT 2012 Rank 40 Aligned Residues 304 % Identity 17% Template c2ja2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: mycobacterium tuberculosis glutamyl-trna synthetase Resolution 1.65 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	Q	T	I	V	V	D	Y	S	A	P	N	V	A	K	E	M	H	V	G	H	L	R	S	T	I	I	G	D	A	A	V	R	T	L	E	F	L	G	H	K	V	I	R	A	N	H	V	G	D	W	G	T	Q	F	G	M	L	I	A	W	L	E	K	Q	Q	Q	E	N	A	G	E	M	E	L	A	D	L	E
Query Conservation
Alig confidence											.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	E	T	V	R	V	R	F	.	C	P	S	P	T	G	T	P	H	V	G	L	V	R	T	A	L	F	N	W	A	Y	A	R	.	.	.	.	.	H	T	G	G	T	F	V	F	R	I	E	D	T	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	D	S	E	E	S	Y	L	A	L	L
Template Known Secondary structure		S									.				S	S	S	S		B																.	.	.	.	.			T							B					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure											.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50															.	.	.	.	.	.	.	.	.	60	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.													.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	Y	R	D	A	K	K	H	Y	D	E	D	E	.	.	.	.	.	.	.	.	.	.	.	.	E	F	A	E	R	A	R	N	Y	V	V	K	L	Q	S	G	D	E	Y	F	R	E	M	W	R	K	L	V	D	I	T	M	T	Q	N	Q	I	T	Y	D	R	L	N	V	T	L	T	R	D	D	V	M	G	E
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																							.	.	.	.	.	.
Template Conservation																																																	.	.	.																							.	.	.	.	.	.
Template Sequence		D	A	L	R	W	L	G	L	D	W	D	E	G	P	E	V	G	G	P	Y	G	P	Y	R	Q	S	Q	R	A	E	I	Y	R	D	V	L	A	R	L	L	A	A	G	E	A	Y	H	.	.	.	A	F	S	T	P	E	E	V	E	A	R	H	V	A	A	G	R	N	P	K	L	G	.	.	.	.	.	.	Y	D
Template Known Secondary structure								T				S	B	B	T	T	T	B		T	T				B	G	G	G															T	T	S				.	.	.															T	T			T	T	S		.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.																							.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.							280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																							.	.	.	.	.	.																						.	.
Query SS confidence																							.	.	.	.	.	.																						.	.
Query Sequence		S	L	Y	N	P	M	L	P	G	I	V	A	D	L	K	A	K	G	L	A	V	.	.	.	.	.	.	E	S	E	G	A	T	V	V	F	L	D	E	F	K	N	K	E	G	E	P	M	.	.	G	V	I	I	Q	K	K	D	G	G	Y	L	Y	T	T	T	D	I	A	C	A	K	Y	R	Y	E	T	L	H	A
Query Conservation																							.	.	.	.	.	.																						.	.
Alig confidence																							.	.	.	.	.	.																						.	.																								.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		N	F	D	R	H	L	T	D	A	Q	R	A	A	Y	L	A	E	G	R	Q	P	V	V	R	L	R	M	P	D	D	D	L	A	W	N	D	L	V	R	G	P	V	T	F	A	A	G	S	V	P	D	F	A	L	T	R	A	S	G	D	P	L	Y	T	L	V	N	P	C	D	D	A	L	.	.	.	.	M	K	I
Template Known Secondary structure			G	G	G	G												T	T											S	S							T	T	T							T	T		S				B	S	B		T	T	S		B													.	.	.	.	T	T
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		D	R	V	L	Y	Y	I	D	S	R	Q	H	Q	H	L	M	Q	A	W	A	I	V	R	K	A	.	.	.	G	Y	V	P	E	S	V	P	L	E	H	H	M	F	G	M	M	L	G	K	D	G	K	P	F	K	T	R	A	G	G	T	V	K	L	A	D	L	L	D	E	A	L	E	R	A	R	R	L	V	A	E
Query Conservation																											.	.	.
Alig confidence							.	.																			.	.	.												.	.
Template Conservation							.	.																																	.	.
Template Sequence		T	H	V	L	R	.	.	G	E	D	L	L	P	S	T	P	R	Q	L	A	L	H	Q	A	L	I	R	I	G	V	A	E	R	I	P	K	F	A	H	.	.	L	P	T	V	L	G	E	G	T	K	K	L	S	K	R	D	P	Q	S	N	L	F	A	H	R	D	R	G	F	I	P	E	G	L	L	N	Y	L	A
Template Known Secondary structure							.	.		G	G	G	G	G	G														T	T	S										.	.							S	S	S	S	B			T	T	S	G	G	G	B								T
Template Predicted Secondary structure							.	.																																	.	.
Template SS confidence
		210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	P	D	M	P	A	D	E	L	E	K	L	A	N	A	V	G	I	G	A	V	K	Y	A	D	L	S	K	N	R	T	T	D	Y	I	F	D	W	D	N	M	L	A	F	E	G
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		L	L	G	W	S	I	A	D	D	H	D	L	F	G	L	D	.	.	.	E	M	V	A	A	F	D	V	A	D	V	N	S	S	P	A	R	F	D	Q	K	K	A	D	A	L	N	A
Template Known Secondary structure		T	S	S			S		S	S								.	.	.								G	G	G				S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions