Job Description P11875 Confidence 98.07% Date Thu Jan 5 11:32:57 GMT 2012 Rank 55 Aligned Residues 201 % Identity 16% Template c2j5bA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of the tyrosyl trna synthetase from acanthamoeba2 polyphaga mimivirus complexed with tyrosynol Resolution 2.20 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	Q	T	I	V	V	D	Y	S	A	P	N	V	A	K	E	M	H	V	G	H	L	R	S	T	I	I	G	D	A	A	V	R	T	L	E	F	L	G	H	K	V	I	R	A	N	H	V	G	D	W	G	T	Q	F	G	M	L	I	A	W	L	E	K	Q	Q	Q	E	N	A	G	E	M	E	L	A	D	L	E
Query Conservation
Alig confidence									.																						.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																						.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	R	I	F	T	A	.	Y	N	G	F	E	P	S	G	R	I	H	I	A	Q	A	L	I	T	V	M	N	.	.	T	N	N	M	I	E	C	.	G	G	Q	M	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	A
Template Known Secondary structure			T						.								S	S		B											.	.							T	.	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.																						.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.		.	.	.	.	.	.																																	.	.	70
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	Y	R	D	A	K	K	H	Y	D	E	D	E	E	F	A	E	R	A	R	N	Y	V	V	K	L	Q	S	G	D	E	Y	F	R	E	M	W	R	K	L	V	D	I	T	M	T	Q	N	Q	I	T	Y	D	R	L	N	V	T	L	T	R	D	D	V	M	G	E	S	L	Y	N	P	M	L	P	G	I	V	A
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	W	F	A	K	M	N	L	K	M	N	G	D	I	N	K	I	R	E	L	G	R	Y	F	I	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	A	C	G	I	N	L	D	G	T	R	F	I	W	A	S	E	F	I	A	S	N	P	S	Y	I	E
Template Known Secondary structure								T	T	G	G	G	G																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T			G	G	G
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	K	A	K	G	L	A	V	E	S	E	G	A	T	V	V	F	L	D	E	F	K	N	K	E	G	E	P	M	G	V	I	I	Q	K	K	D	G	G	Y	L	Y	T	T	T	D	I	A	C	A	K	Y	R	Y	E	T	L	H	A	D	R	V	L	Y	Y	I	D	S	R	Q	H	Q	H	L	M	Q	A	W	A
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Sequence		R	M	L	D	I	A	E	F	S	T	I	S	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	I	F	Y	P	.	.	.	C	M	Q	A	A	D	V	F	E	L	V	P	E	G	I	D	I	C	Q	L	G	I	D	Q	R	K	V	N	M	L	A	I	E
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						.	.	.										S	S	T	T			S					B	G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.																									140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																													.	.										.
Query SS confidence																													.	.										.
Query Sequence		I	V	R	K	A	G	Y	V	P	E	S	V	P	L	E	H	H	M	F	G	M	M	L	G	K	D	G	.	.	K	P	F	K	T	R	A	G	G	.	T	V	K	L	A	D	L	L	D	E	A	L	E	R	A	R	R
Query Conservation																													.	.										.
Alig confidence												.	.	.	.														.	.										.
Template Conservation												.	.	.	.
Template Sequence		Y	A	N	D	R	G	L	K	I	P	.	.	.	.	I	S	L	S	H	H	M	L	M	S	L	S	G	P	K	K	K	M	S	K	S	D	P	Q	G	A	I	F	M	D	D	T	E	Q	E	V	S	E	K	I	S	R
Template Known Secondary structure						T	T					.	.	.	.					B						T	T		S	S				S	T	T		G	G	G	S		B	T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions