Job Description P11875 Confidence 99.74% Date Thu Jan 5 11:32:57 GMT 2012 Rank 45 Aligned Residues 279 % Identity 13% Template c2hz7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutaminyl-trna synthetase; PDBTitle: crystal structure of the glutaminyl-trna synthetase from2 deinococcus radiodurans Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	K	Q	T	I	V	V	D	Y	S	A	P	N	V	A	K	E	M	H	V	G	H	L	R	S	T	I	I	G	D	A	A	V	R	T	L	E	F	L	G	H	K	V	I	R	A	N	H	V	G	D	W	G	T	Q	F	G	M	L	I	A	W	L	E	K	Q	Q	Q	E	N	A	G	E	M	E	L	A	D	L
Query Conservation
Alig confidence												.																									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	Y	P	R	V	V	T	R	F	.	P	P	D	P	S	G	Y	A	H	L	G	H	V	F	A	S	L	L	D	F	N	T	A	R	.	.	Q	Y	G	G	Q	F	N	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	D	T	N	P	E	L	A	R	Q	E	Y	V	D	S	I
Template Known Secondary structure		T	S		S	S						.				S	S	S			B																.	.		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T
Template Predicted Secondary structure												.																									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.																		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		E	G	F	Y	R	D	A	K	K	H	Y	D	E	.	.	.	.	D	E	E	F	A	E	R	A	R	N	Y	V	V	K	L	Q	S	G	D	E	Y	F	R	E	M	W	R	K	L	V	D	I	T	M	T	Q	N	Q	I	T	Y	D	R	L	N	V	T	L	T	R	D	D	V	M	G	E	S	L	Y	N	P	M	L
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		A	D	D	L	K	W	L	G	L	D	W	G	E	H	F	Y	Y	A	S	D	Y	F	D	R	Y	Y	A	Y	A	E	Q	L	I	R	Q	G	D	A	Y	.	.	.	.	.	.	.	V	E	S	V	S	P	E	E	L	S	R	L	R	G	N	A	T	T	P	G	T	P	S	P	Y	R	D	R	S	V	E	E	N	L
Template Known Secondary structure									T				T	T					G	G	G	G														T	T	S			.	.	.	.	.	.	.				S											B	T	T	B						T	T	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.												.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	I	V	A	D	L	K	A	K	G	L	A	V	E	S	E	G	A	T	V	V	F	L	D	E	F	K	N	K	E	G	E	P	M	G	V	I	I	Q	.	.	.	.	.	.	.	.	.	.	.	K	K	D	G	G	Y	L	Y	T	T	T	D	I	A	C	A	K	Y	R	Y	E	T	L	H	A	D	R	V	L
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																																.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation									.	.																																																													.	.	.	.
Template Sequence		D	L	L	R	R	M	K	.	.	A	G	E	F	A	D	G	E	H	V	L	R	A	K	I	D	L	T	A	P	N	M	K	L	R	D	P	V	L	Y	R	I	V	N	K	P	H	F	R	T	S	D	E	W	H	I	Y	P	A	Y	D	F	E	H	P	L	Q	D	A	I	.	.	.	.	E	G	V	T	H	S	M
Template Known Secondary structure									.	.	T	T		S		T	T	S									T	T		S	S	G	G	G	S	S											B	T	T	T	B	T	S		S																.	.	.	.		T		S
Template Predicted Secondary structure									.	.																																																													.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.																.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Y	I	D	S	R	Q	H	Q	H	L	M	Q	A	W	A	I	V	R	K	A	G	Y	V	P	E	S	V	P	L	E	H	H	M	F	G	M	M	L	G	K	D	G	K	P	F	K	T	R	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	K	L	A	D	L	L	D	E	A	L	E
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.																					.											.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation			.	.																					.											.	.	.																																										.	.
Template Sequence		C	.	.	S	L	E	F	V	D	N	R	A	I	Y	D	W	L	M	E	K	L	N	F	.	D	P	R	P	H	Q	Y	E	F	G	.	.	.	R	R	G	L	E	Y	T	I	T	S	K	R	K	L	R	E	L	V	Q	A	G	R	V	S	G	W	D	D	P	R	M	P	T	L	R	A	Q	R	R	L	G	.	.
Template Known Secondary structure			.	.		G	G	G	T	T	T											T	T		.	S	S									.	.	.					T	T														T	T	S	S	S	S	T	T		T	T	S	S	B								T	.	.
Template Predicted Secondary structure			.	.																					.											.	.	.																																										.	.
Template SS confidence
		270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		R	A	R	R	L	V	A	E	K	N	P	D	M	P	A	D	E	L	E	K	L	A	N	A	V	G	I	G	A	V	K	Y	A	D	L	S	K	N	R	.	T	T	D	Y	I	F	D	W	D	N	M	L	A	F	E
Query Conservation																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	P	E	A	V	R	A	F	A	A	Q	I	G	V	S	R	T	N	R	T	V	D	I	A	V	Y	E	N	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions