Job Description P11875 Confidence 96.69% Date Thu Jan 5 11:32:57 GMT 2012 Rank 69 Aligned Residues 168 % Identity 17% Template c2el7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from thermus2 thermophilus Resolution 2.50 Å

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.						.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.																					.
Query SS confidence																											.	.	.	.	.																					.
Query Sequence		L	Y	Y	I	D	S	R	Q	H	Q	H	L	M	Q	A	W	A	I	V	R	K	A	G	Y	V	.	.	.	.	.	P	E	S	V	P	L	E	H	H	M	F	G	M	M	L	G	K	D	G	K	.	P	F	K	T	R	A	G	G	T	V	K	L	A	D	L	L	D	E	A	L	E	R	A	R	R	L	V	A	E
Query Conservation																											.	.	.	.	.																					.
Alig confidence																											.	.	.	.	.																					.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	P	V	G	E	D	Q	V	Q	H	I	E	L	T	R	E	I	A	R	R	F	N	H	L	F	G	E	T	F	P	E	P	Q	A	L	L	N	P	E	A	P	R	V	P	G	I	D	G	K	A	K	M	S	K	S	L	G	N	T	I	G	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							G	G	G																			S	S											T	T	S				B		T	T	S	S	S	B			T	T	T	T				B	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	P	D	M	P	A	D	E	L	E	K	L	A	N	A	V	G	I	G	A	V	K	Y	A	D	L	S	K	N	R	T	T	D	Y	I	F	D	W	D	N	M	L	A	F	E	G	N	T	A	P	Y	M	Q	Y	A	Y	T	R	V	L	S	V	F	R	K	A	E	I	D	E	E	Q	L	A	A	A	P	V	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	E	S	I	W	Q	K	I	Q	H	L	P	D	D	P	T	I	L	F	T	Y	L	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	E	D	R	E	A	Q	L	A	A	R	L	L	Q	F	E	E	T	L	T	V	V	A	R	E	G	T	P	H	V	M	C	A	Y	L	Y	D	L	A	G	L	F	S	G	F	Y	E	H	C	P	I	L	S	A	E	N	E	E	V	R	N	S	R	L	K	L	A	Q	L	T	A	K	T	L	K	L	G	L	D
Query Conservation
Alig confidence																																																							.	.	.
Template Conservation																																																							.	.	.
Template Sequence		F	A	P	K	D	L	V	E	A	L	K	E	E	Y	R	K	A	G	V	G	T	Y	V	V	K	R	I	L	F	D	H	L	M	E	A	L	R	P	I	R	E	R	A	E	A	L	K	K	D	P	D	Y	V	.	.	.	M	D	A	L	L	E	G	A	K	R	A	R	A	V	A	Q	A	T	M	E	E	V	R	E
Template Known Secondary structure			S														T	T		S																																			.	.	.
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		568	.	570	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	G	I	E	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	G	L	L	L	P
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions