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Job DescriptionP11875
Confidence98.27%DateThu Jan 5 11:32:57 GMT 2012
Rank51Aligned Residues192
% Identity19%Templatec2cybA_
PDB info PDB header:ligaseChain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with2 l-tyrosine from archaeoglobus fulgidus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  YSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKK
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Template Sequence  YVGYEPSGEIHLGHMMTVQK. . . LMDLQEA. GFEIIVL. . LADIHAYLNEKGTF. . . . . . . . . . . . . . . . . . . . . . . . . .
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S

B...T.T
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TT


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   36...40.........50..... ....60.. ....... 70.........80...
 
   199200.........210.........220.........230.........240.........250.........260.........270........
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Query Sequence  HYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EEIAEVADYNKKVFIALGLDESRAKFVLGSEYQLS. RDYVLDVLKMARI
Template Known Secondary structure  ...............................TT

TTT
GGGTTTS.
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   84.....90.........100.........110........ .120.........130.
 
   279280.........290.........300.........310.........320.........330.........340.........350........
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Query Sequence  VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV
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Template Sequence  TTLNRARRSMDEVSRRKEDPMV. . . . . . . . SQMIYPLMQAL. . . . . . DIAHLGVDLAVGGIDQRKIHMLARENLPRLGYS
Template Known Secondary structure  S
TTTT
S
SSS

T..............TT
SGGGGGGGT

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   132.......140.........150... ......160.... .....170.........180.........190.......
 
   359360.........370.........380.........390..
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Query Sequence  PESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD
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Template Sequence  SPV. . . . CLHTPILVGLDGQKMSSSKGNYISVRD
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B
TTSSB

TTTT
S
BTT
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   198.200 .........210.........220.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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