Job Description P11875 Confidence 99.89% Date Thu Jan 5 11:32:57 GMT 2012 Rank 38 Aligned Residues 306 % Identity 13% Template c2cfoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: non-discriminating glutamyl-trna synthetase from2 thermosynechococcus elongatus in complex with glu Resolution 2.45 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	V	V	D	Y	S	A	P	N	V	A	K	E	M	H	V	G	H	L	R	S	T	I	I	G	D	A	A	V	R	T	L	E	F	L	G	H	K	V	I	R	A	N	H	V	G	D	W	G	T	Q	F	G	M	L	I	A	W	L	E	K	Q	Q	Q	E	N	A	G	E	M	E	L	A	D	L	E	G	F	Y
Query Conservation
Alig confidence								.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	R	V	R	L	.	A	P	S	P	T	G	N	L	H	I	G	T	A	R	T	A	V	F	N	W	L	Y	A	R	.	.	.	.	.	H	R	G	G	K	F	I	L	R	I	E	D	T	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	S	R	P	E	Y	T	E	N	I	L	E	G	L
Template Known Secondary structure								.				T	T	S			B																.	.	.	.	.		T	T											S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure								.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.															.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		194	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		R	D	A	K	K	H	Y	D	E	D	E	.	.	.	.	E	F	A	E	R	A	R	N	Y	V	V	K	L	Q	S	G	D	E	Y	F	R	E	M	W	R	K	L	V	D	I	T	M	T	Q	N	Q	I	T	Y	D	R	L	N	V	T	L	T	R	D	D	V	M	G	E	S	L	Y	N	P	M	L	P	G	I	V
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																						.	.	.
Template Conservation																																						.	.	.
Template Sequence		Q	W	L	G	L	T	W	D	E	G	P	Y	F	Q	S	D	R	L	D	L	Y	R	Q	A	I	Q	T	L	L	D	K	G	L	A	Y	Y	.	.	.	C	Y	C	T	P	E	E	L	E	A	L	R	A	E	Q	K	A	K	G	Q	A	P	R	Y	D	N	R	H	R	H	L	T	P	E	E	Q	A	A	F	E	A
Template Known Secondary structure				T	T				S						G	G	G															T	T	S				.	.	.																			T			S	S				T	T	T	T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.						.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.										.	.	.	.	.
Query SS confidence																																.	.	.	.	.										.	.	.	.	.
Query Sequence		A	D	L	K	A	K	G	L	A	V	E	S	E	G	A	T	V	V	F	L	D	E	F	K	N	K	E	G	E	P	.	.	.	.	.	M	G	V	I	I	Q	K	K	D	.	.	.	.	.	G	G	Y	L	Y	T	T	T	D	I	A	C	A	K	Y	R	Y	E	T	L	H	A	D	R	V	L	Y	Y	I	D	S
Query Conservation																																.	.	.	.	.										.	.	.	.	.
Alig confidence																																.	.	.	.	.										.	.	.	.	.												.	.	.	.													.	.
Template Conservation																																																														.	.	.	.													.	.
Template Sequence		A	G	R	T	P	V	I	R	F	K	I	E	D	D	R	Q	I	E	W	Q	D	L	V	R	G	R	V	S	W	Q	G	A	D	L	G	G	D	M	V	I	A	R	A	A	P	R	G	E	I	G	Y	P	L	Y	N	L	V	V	V	V	.	.	.	.	D	D	I	A	M	G	I	T	D	V	I	R	.	.	G	E
Template Known Secondary structure		T	T											T	T								T	T	T							G	G	G	G		S	S						S			T	T	S				B									.	.	.	.					T	T		S					.	.		G
Template Predicted Secondary structure																																																														.	.	.	.													.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210			.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	H	Q	H	L	M	Q	A	W	A	I	V	R	K	A	G	Y	V	P	E	S	V	P	L	E	H	H	M	F	G	M	M	L	G	K	D	G	K	P	F	K	T	R	A	G	G	T	V	K	L	A	D	L	L	D	E	A	L	E	R	A	R	R	L	V	A	E	K	N	P	D	M	P	A	D	E	L	E	K
Query Conservation
Alig confidence																					.	.									.	.
Template Conservation																					.	.									.	.
Template Sequence		D	H	I	G	N	T	P	K	Q	I	L	L	Y	E	A	L	G	A	T	.	.	P	P	N	F	A	H	T	P	.	.	L	I	L	N	S	T	G	Q	K	L	S	K	R	D	G	V	T	S	I	S	D	F	R	A	M	G	Y	L	A	P	A	L	A	N	Y	M	T	L	L	G	W	S	P	P	E	G	V	G	E
Template Known Secondary structure		G	G	T	T												T	T			.	.									.	.					S	S	S	S	B			T	T	S	S			B							T	T													T	T	B				T	T	T		S
Template Predicted Secondary structure																					.	.									.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	N	A	V	G	I	G	A	V	K	Y	A	D	L	S	K	N	R	T	T	D	Y	I	F	D	W	D	N	M	L	A	F	E	G
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		L	F	T	.	.	L	D	L	A	A	K	H	F	S	F	E	R	I	N	K	A	G	A	R	F	D	W	D	K	L	N	W	L	N	R
Template Known Secondary structure					.	.										S	T	T	B		S	S
Template Predicted Secondary structure					.	.
Template SS confidence
		289	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions