Job Description P11875 Confidence 99.94% Date Thu Jan 5 11:32:57 GMT 2012 Rank 35 Aligned Residues 260 % Identity 18% Template c1g59A_ PDB info PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: glutamyl-trna synthetase complexed with trna(glu). Resolution 2.40 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	V	A	K	E	M	H	V	G	H	L	R	S	T	I	I	G	D	A	A	V	R	T	L	E	F	L	G	H	K	V	I	R	A	N	H	V	G	D	W	G	T	Q	F	G	M	L	I	A	W	L	E	K	Q	Q	Q	E	N	A	G	E	M	E	L	A	D	L	E	G	F	Y	R	D	A	K	K	H	Y	D
Query Conservation
Alig confidence																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	P	T	G	D	P	H	V	G	T	A	Y	I	A	L	F	N	Y	A	W	A	R	.	.	.	.	.	R	N	G	G	R	F	I	V	R	I	E	D	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	R	Y	V	P	G	A	E	E	R	I	L	A	A	L	K	W	L	G	L	S	Y	D
Template Known Secondary structure					S	S	S		B																.	.	.	.	.		T	T							B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			T	T												T	T				S
Template Predicted Secondary structure																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.															.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		202	.	.													.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	E	.	.	.	.	.	.	.	.	.	.	.	.	E	F	A	E	R	A	R	N	Y	V	V	K	L	Q	S	G	D	E	Y	F	R	E	M	W	R	K	L	V	D	I	T	M	T	Q	N	Q	I	T	Y	D	R	L	N	V	T	L	T	R	D	D	V	M	G	E	S	L	Y	N	P	M	L	P	G	I	V
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Sequence		E	G	P	D	V	A	A	P	T	G	P	Y	R	Q	S	E	R	L	P	L	Y	Q	K	Y	A	E	E	L	L	K	R	G	W	A	Y	R	.	.	.	.	.	.	A	F	E	T	P	E	E	L	E	Q	I	R	K	E	K	G	G	Y	D	.	.	.	.	.	.	.	.	G	R	A	R	N	I	P	P	E	E	A
Template Known Secondary structure		B		S	S	S			S	S	S		S	B	G	G	G	G													T	T	T	S				.	.	.	.	.	.															S	S	S			.	.	.	.	.	.	.	.		G	G	G	G	S
Template Predicted Secondary structure																																						.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.
		270	.	.	.	.	.	.	.	.							.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure											.	.	.	.	.	.											.	.	.
Query SS confidence											.	.	.	.	.	.											.	.	.
Query Sequence		A	D	L	K	A	K	G	L	A	.	.	.	.	.	.	V	E	S	E	G	A	T	V	V	F	.	.	.	L	D	E	F	K	N	K	E	G	E	P	M	G	V	I	I	Q	K	K	D	G	G	Y	L	Y	T	T	T	D	I	A	C	A	K	Y	R	Y	E	T	L	H	A	D	R	V	L	Y	Y	I	D	S	R
Query Conservation											.	.	.	.	.	.											.	.	.
Alig confidence											.	.	.	.	.	.											.	.	.																																.	.	.	.													.	.
Template Conservation																																																													.	.	.	.													.	.
Template Sequence		E	E	R	A	R	R	G	E	P	H	V	I	R	L	K	V	P	R	P	G	T	T	E	V	K	D	E	L	R	G	V	V	V	Y	D	N	Q	E	I	P	D	V	V	L	L	K	S	D	G	Y	P	T	Y	H	L	A	N	V	V	.	.	.	.	D	D	H	L	M	G	V	T	D	V	I	R	.	.	A	E	E
Template Known Secondary structure							T	T											S	S								T	T	T							G	G	G	S								T	T	S		B									.	.	.	.					T	T							.	.		G	G
Template Predicted Secondary structure																																																													.	.	.	.													.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.			.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	Q	H	L	M	Q	A	W	A	I	V	R	K	A	G	Y	V	P	E	S	V	P	L	E	H	H	M	F	G	M	M	L	G	K	D	G	K	P	F	K	T	R	A	G	G	T	V	K	L	A	D	L	L	D	E	A	L	E	R	A	R	R	L	V	A	E	K	N	P	D	M	P	A	D	E	L	E	K	L
Query Conservation
Alig confidence																				.	.							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	L	V	S	T	P	I	H	V	L	L	Y	R	A	F	G	W	E	.	.	A	P	R	F	Y	H	.	.	M	P	L	L	R	N	P	D	K	T	K	I	S	K	R	K	S	H	T	S	L	D	W	Y	K	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	T	T	T											T	T			.	.							.	.					B		T	T	S	S	B			T	T	T	S			B							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.				.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		A	N	A	V	G	I	G	A	V	K	Y	A	D	L	S	.	.	.	K	N	R	T	T	D	Y	I	F	D	W	D	N	M	L	A
Query Conservation																	.	.	.
Alig confidence		.	.														.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	F	L	P	E	A	L	R	N	Y	L	C	L	M	G	F	S	M	P	D	G	R	E	I	F	T	L	E	E	F	I	Q
Template Known Secondary structure		.	.	T													T	T	B			T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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