Return to main results Retrieve Phyre Job Id

Job DescriptionP77339
Confidence5.54%DateWed Jan 25 15:21:11 GMT 2012
Rank80Aligned Residues88
% Identity20%Templated1d0qa_
SCOP infoRubredoxin-like Zinc beta-ribbon DNA primase zinc finger
Resolution1.71

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80.........90 .........100.........110.........120.........130........
Predicted Secondary structure 













..
































Query SS confidence 





























. .















































Query Sequence  VSEEDIQAALDGDEFRVPLNSPVILVQSGN. . RAPETIMQEEMRKYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAE
Query Conservation 








       



  
 





..  

  
   
 





 




 
           
 
   


  
Alig confidence 





























..


.

















...















..




Template Conservation 
    
  

  
 
 
         
 
      .

 
 
  

  
     ...   
  

  

 
 
..
    
Template Sequence  IPEETIEAIRRGVDIVDVIGEYVQLKRQGRNYFGL. CPFHGEKTPSFSVSPEKQ. . . IFHCFGCGAGGNAFTF. . LMDIE
Template Known Secondary structure  S


TTTS

TT
.
SSS

SS

TTTT...TTT


..
Template Predicted Secondary structure 










.













...







..
Template SS confidence 















































































   5....10.........20.........30......... 40.........50....... ..60.........70... .....
 
   139140.........150....
Predicted Secondary structure 




Query SS confidence 















Query Sequence  NMNWMQALRFVAAKGH
Query Conservation    


  








Alig confidence 















Template Conservation    

 

   
    
Template Sequence  GIPFVEAAKRLAAKAG
Template Known Secondary structure  T

T
Template Predicted Secondary structure 



Template SS confidence 















   7980.........90....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions