 |
Job Description | P77339 | Confidence | 5.15% | Date | Wed Jan 25 15:21:11 GMT 2012 |
Rank | 88 | Aligned Residues | 67 |
% Identity | 18% | Template | c2vfvA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:xylitol oxidase; |
PDBTitle: alditol oxidase from streptomyces coelicolor a3(2): complex2 with sulphite
|
Resolution | 1.72 Å |
|
 |
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | E | D | I | Q | A | A | L | D | G | D | E | F | R | V | P | L | N | S | P | V | I | L | V | Q | S | G | . |
. |
. |
. |
. |
. |
. |
N | R | A | P | E | T | I | M | Q | E | E | M | R | K | Y | Y | T | V | S | T | F | S | G | I | P | D | R | Q | K | P | L | T | C | N | K | N | K | D | K | N | E | N | E | D | V |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |
|
|
|
|
| . | . | . | . | . | . | . |
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   | . | . | . | . | . | . | . | . |
|   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |   |
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
Template Sequence |   |
S | L | D | A | L | R | A | L | V | A | D | S | A | R | . |
. |
. |
. |
. |
. |
. |
. |
V | R | V | L | G | S | G | H | S | F | N | E | I | A | E | P | G | D | G | G | V | L | L | S | L | A | G | L | P | S | V | V | D | V | D | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | A | R | T | V |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |
| S | S | . | . | . | . | . | . | . | . |  |  |  |  | S | S |
|
|
|
| S | S | T | T |
|
|
| T | T |
|  |  |  |  | S | T | T | S |
|
|
|  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . |
  |
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | S | A | E | N | M | N | W | M | Q | A | L | R | F | V | A | A | K | G |
Query Conservation |   |
|
|   |   |   |   |
|
|
|   |   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|
Template Sequence |   |
R | V | G | G | G | V | R | Y | A | E | L | A | R | V | V | H | A | R | G |
Template Known Secondary structure |   |
 |  |  | T | T |
| B |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|