Return to main results Retrieve Phyre Job Id

Job DescriptionP77339
Confidence8.19%DateWed Jan 25 15:21:11 GMT 2012
Rank55Aligned Residues88
% Identity15%Templatec1mbbA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:uridine diphospho-n-acetylenolpyruvylglucosamine PDBTitle: oxidoreductase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50......... 60.........70 ......... 80.........90.........100.........110....
Predicted Secondary structure 









.....
...







..













Query SS confidence 














. . . . .










. . .








. .


































Query Sequence  QQLTDKDLFGNETTL. . . . . AVSEEDIQAAL. . . DGDEFRVPL. . NSPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIP
Query Conservation 







 




 ..... 








 ...      


..
  
 





  

  
   
 





 




Alig confidence 














.....










...








..









...















.




Template Conservation    
   

  


 
  

 
 
 


   
  
    


 
 






  
 ...  
 


       
 . 
   
Template Sequence  HSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED. . . YRGTVIINRIKGIEIH. DEPDA
Template Known Secondary structure 
B
GGGSTT



B
STT

SS
TT
S
...



.TT
Template Predicted Secondary structure 

























...







.


Template SS confidence 















































































   3......10.........20.........30.........40.........50....... ..60.........70... .....
 
   115....120.........130.........140.........150...
Predicted Secondary structure 



























Query SS confidence 






































Query Sequence  DRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKG
Query Conservation   
           
 
   


    


  







Alig confidence 

.................



















Template Conservation    .................
 
 

  
  
       
Template Sequence  WY. . . . . . . . . . . . . . . . . LHVGAGENWHRLVKYTLQEG
Template Known Secondary structure  .................TTSBTT
Template Predicted Secondary structure  .................





Template SS confidence 






































   7980 .........90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions