Email l.a.kelley@imperial.ac.uk Description P18006 Date Thu Jan 5 11:36:33 GMT 2012 Unique Job ID 94ee705249be05e7

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1u2ma_ 81.7 9 Fold:OmpH-like Superfamily:OmpH-like Family:OmpH-like 2 c2kkmA_ 75.1 19 PDB header:translation Chain: A: PDB Molecule:translation machinery-associated protein 16; PDBTitle: solution nmr structure of yeast protein yor252w [residues2 38-178]: northeast structural genomics consortium target3 yt654 3 d2amya1 40.1 21 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 4 c3nuqA_ 36.8 11 PDB header:hydrolase Chain: A: PDB Molecule:putative nucleotide phosphatase; PDBTitle: structure of a putative nucleotide phosphatase from saccharomyces2 cerevisiae 5 d1nh2d1 31.1 11 Fold:Transcription factor IIA (TFIIA), alpha-helical domain Superfamily:Transcription factor IIA (TFIIA), alpha-helical domain Family:Transcription factor IIA (TFIIA), alpha-helical domain 6 d1nvpd1 30.9 17 Fold:Transcription factor IIA (TFIIA), alpha-helical domain Superfamily:Transcription factor IIA (TFIIA), alpha-helical domain Family:Transcription factor IIA (TFIIA), alpha-helical domain 7 d2cbia1 26.9 23 Fold:Hyaluronidase domain-like Superfamily:Hyaluronidase post-catalytic domain-like Family:Hyaluronidase post-catalytic domain-like 8 d1eb7a2 26.7 21 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase 9 c3o5cA_ 24.2 21 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c551 peroxidase; PDBTitle: cytochrome c peroxidase bccp of shewanella oneidensis 10 c1nvpD_ 24.1 17 PDB header:transcription/dna Chain: D: PDB Molecule:transcription initiation factor iia gamma chain; PDBTitle: human tfiia/tbp/dna complex 11 c1xviA_ 23.5 25 PDB header:hydrolase Chain: A: PDB Molecule:putative mannosyl-3-phosphoglycerate phosphatase; PDBTitle: crystal structure of yedp, phosphatase-like domain protein2 from escherichia coli k12 12 d1xvia_ 23.5 25 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 13 c1zzhA_ 23.1 18 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c peroxidase; PDBTitle: structure of the fully oxidized di-heme cytochrome c2 peroxidase from r. capsulatus 14 c2fncA_ 20.9 14 PDB header:sugar binding protein Chain: A: PDB Molecule:maltose abc transporter, periplasmic maltose-binding PDBTitle: thermotoga maritima maltotriose binding protein bound with2 maltotriose. 15 d2qtia1 20.0 14 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 16 d1v92a_ 20.0 10 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 17 c2vhdB_ 19.9 21 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c551 peroxidase; PDBTitle: crystal structure of the di-haem cytochrome c peroxidase2 from pseudomonas aeruginosa - mixed valence form 18 d1iqca2 19.8 12 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase 19 c2dalA_ 19.4 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein kiaa0794; PDBTitle: solution structure of the novel identified uba-like domain2 in the n-terminal of human fas associated factor 1 protein 20 d1b4ub_ 18.6 8 Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like 21 c3kfuJ_ not modelled 18.5 14 PDB header:ligase/rna Chain: J: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit c; PDBTitle: crystal structure of the transamidosome 22 d2jrxa1 not modelled 18.1 21 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 23 d2f2ac1 not modelled 17.9 11 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Glu-tRNAGln amidotransferase C subunit Family:Glu-tRNAGln amidotransferase C subunit 24 c1nh2D_ not modelled 17.9 11 PDB header:transcription/dna Chain: D: PDB Molecule:transcription initiation factor iia small chain; PDBTitle: crystal structure of a yeast tfiia/tbp/dna complex 25 d2choa1 not modelled 16.7 15 Fold:Hyaluronidase domain-like Superfamily:Hyaluronidase post-catalytic domain-like Family:Hyaluronidase post-catalytic domain-like 26 d1nmla2 not modelled 16.2 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase 27 c2q9rA_ not modelled 15.7 14 PDB header:unknown function Chain: A: PDB Molecule:protein of unknown function; PDBTitle: crystal structure of a duf416 family protein (sbal_3149) from2 shewanella baltica os155 at 1.91 a resolution 28 c3anoA_ not modelled 15.6 22 PDB header:transferase Chain: A: PDB Molecule:ap-4-a phosphorylase; PDBTitle: crystal structure of a novel diadenosine 5',5'''-p1,p4-tetraphosphate2 phosphorylase from mycobacterium tuberculosis h37rv 29 d2juwa1 not modelled 15.5 15 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 30 d2juza1 not modelled 15.4 14 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 31 c3h0mU_ not modelled 15.3 11 PDB header:ligase Chain: U: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit c; PDBTitle: structure of trna-dependent amidotransferase gatcab from2 aquifex aeolicus 32 d2jpqa1 not modelled 14.7 21 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 33 c2kjwA_ not modelled 14.1 22 PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s6; PDBTitle: solution structure and backbone dynamics of the permutant2 p54-55 34 d2c42a1 not modelled 13.9 18 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:PFOR Pyr module 35 c3mpoD_ not modelled 13.8 36 PDB header:hydrolase Chain: D: PDB Molecule:predicted hydrolase of the had superfamily; PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis 36 c2c1uB_ not modelled 13.7 15 PDB header:oxidoreductase Chain: B: PDB Molecule:di-haem cytochrome c peroxidase; PDBTitle: crystal structure of the di-haem cytochrome c peroxidase2 from paracoccus pantotrophus - oxidised form 37 c1iqcB_ not modelled 13.4 12 PDB header:oxidoreductase Chain: B: PDB Molecule:di-heme peroxidase; PDBTitle: crystal structure of di-heme peroxidase from nitrosomonas europaea 38 c3c8mA_ not modelled 12.3 16 PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase from thermoplasma2 volcanium 39 c3hq7A_ not modelled 12.0 27 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c551 peroxidase; PDBTitle: ccpa from g. sulfurreducens, g94k/k97q/r100i variant 40 d1zyma1 not modelled 11.9 17 Fold:SAM domain-like Superfamily:Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Family:Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 41 d1u7pa_ not modelled 11.7 20 Fold:HAD-like Superfamily:HAD-like Family:Magnesium-dependent phosphatase-1, Mdp1 42 c1odpA_ not modelled 11.2 43 PDB header:lipid transport Chain: A: PDB Molecule:apoa-i peptide; PDBTitle: peptide of human apoa-i residues 166-185. nmr, 5 structures2 at ph 6.6, 37 degrees celsius and peptide:sds mole ratio3 of 1:40 43 c1odrA_ not modelled 11.2 43 PDB header:lipid transport Chain: A: PDB Molecule:apoa-i peptide; PDBTitle: peptide of human apoa-i residues 166-185. nmr, 5 structures2 at ph 6.0, 37 degrees celsius and peptide:dpc mole ratio3 of 1:40 44 c1odqA_ not modelled 11.2 43 PDB header:lipid transport Chain: A: PDB Molecule:apoa-i peptide; PDBTitle: peptide of human apoa-i residues 166-185. nmr, 5 structures2 at ph 3.7, 37 degrees celsius and peptide:sds mole ratio3 of 1:40 45 c1lj2C_ not modelled 10.8 60 PDB header:viral protein/ translation Chain: C: PDB Molecule:eukaryotic protein synthesis initiation factor; PDBTitle: recognition of eif4g by rotavirus nsp3 reveals a basis for2 mrna circularization 46 c3do5A_ not modelled 10.7 11 PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of putative homoserine dehydrogenase (np_069768.1)2 from archaeoglobus fulgidus at 2.20 a resolution 47 d2fuea1 not modelled 10.7 15 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 48 d1gefa_ not modelled 10.4 23 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hjc-like 49 d1xuba1 not modelled 10.4 38 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 50 c3ingA_ not modelled 10.1 16 PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase (np_394635.1) from2 thermoplasma acidophilum at 1.95 a resolution 51 c3mtjA_ not modelled 10.1 24 PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: the crystal structure of a homoserine dehydrogenase from thiobacillus2 denitrificans to 2.15a 52 d1x4pa1 not modelled 9.7 20 Fold:Surp module (SWAP domain) Superfamily:Surp module (SWAP domain) Family:Surp module (SWAP domain) 53 d1ltqa1 not modelled 9.5 27 Fold:HAD-like Superfamily:HAD-like Family:phosphatase domain of polynucleotide kinase 54 c2p11A_ not modelled 9.4 14 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative haloacid dehalogenase-like hydrolase2 (bxe_b1342) from burkholderia xenovorans lb400 at 2.20 a resolution 55 c1zzvA_ not modelled 9.3 16 PDB header:membrane protein, metal transport Chain: A: PDB Molecule:iron(iii) dicitrate transport protein feca; PDBTitle: solution nmr structure of the periplasmic signaling domain2 of the outer membrane iron transporter feca from3 escherichia coli. 56 c3rsiA_ not modelled 9.2 7 PDB header:isomerase Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: the structure of a putative enoyl-coa hydratase/isomerase from2 mycobacterium abscessus atcc 19977 / dsm 44196 57 c1lj2D_ not modelled 8.9 60 PDB header:viral protein/ translation Chain: D: PDB Molecule:eukaryotic protein synthesis initiation factor; PDBTitle: recognition of eif4g by rotavirus nsp3 reveals a basis for2 mrna circularization 58 d2hcfa1 not modelled 8.9 23 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 59 d1qy9a1 not modelled 8.7 36 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 60 c2iexA_ not modelled 8.6 14 PDB header:lyase Chain: A: PDB Molecule:dihydroxynapthoic acid synthetase; PDBTitle: crystal structure of dihydroxynapthoic acid synthetase (gk2873) from2 geobacillus kaustophilus hta426 61 c1nmlA_ not modelled 8.6 15 PDB header:oxidoreductase Chain: A: PDB Molecule:di-haem cytochrome c peroxidase; PDBTitle: di-haemic cytochrome c peroxidase from pseudomonas nautica 617, form2 in (ph 4.0) 62 c1or7C_ not modelled 8.5 14 PDB header:transcription Chain: C: PDB Molecule:sigma-e factor negative regulatory protein; PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea 63 d1or7c_ not modelled 8.5 14 Fold:N-terminal, cytoplasmic domain of anti-sigmaE factor RseA Superfamily:N-terminal, cytoplasmic domain of anti-sigmaE factor RseA Family:N-terminal, cytoplasmic domain of anti-sigmaE factor RseA 64 d2otaa1 not modelled 8.5 21 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 65 d1ng6a_ not modelled 8.4 16 Fold:GatB/YqeY motif Superfamily:GatB/YqeY motif Family:GatB/YqeY domain 66 d1mkza_ not modelled 8.2 23 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 67 c3nzqB_ not modelled 8.1 19 PDB header:lyase Chain: B: PDB Molecule:biosynthetic arginine decarboxylase; PDBTitle: crystal structure of biosynthetic arginine decarboxylase adc (spea)2 from escherichia coli, northeast structural genomics consortium3 target er600 68 d1w85b1 not modelled 8.1 18 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Branched-chain alpha-keto acid dehydrogenase Pyr module 69 d2odfa1 not modelled 8.1 21 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:FGase-like 70 c2d1uA_ not modelled 7.8 16 PDB header:metal transport Chain: A: PDB Molecule:iron(iii) dicitrate transport protein feca; PDBTitle: solution strcuture of the periplasmic signaling domain of2 feca from escherichia coli 71 d1y5ea1 not modelled 7.6 17 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 72 c3pgvB_ not modelled 7.4 17 PDB header:hydrolase Chain: B: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase2 (kpn_04322) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at3 2.39 a resolution 73 d1rkqa_ not modelled 7.4 30 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 74 c3fduF_ not modelled 7.3 10 PDB header:isomerase Chain: F: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a putative enoyl-coa hydratase/isomerase from2 acinetobacter baumannii 75 d1mula_ not modelled 7.3 25 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 76 d1nm8a1 not modelled 7.1 30 Fold:CoA-dependent acyltransferases Superfamily:CoA-dependent acyltransferases Family:Choline/Carnitine O-acyltransferase 77 d1t1ua1 not modelled 7.1 30 Fold:CoA-dependent acyltransferases Superfamily:CoA-dependent acyltransferases Family:Choline/Carnitine O-acyltransferase 78 d1ndba1 not modelled 6.4 30 Fold:CoA-dependent acyltransferases Superfamily:CoA-dependent acyltransferases Family:Choline/Carnitine O-acyltransferase 79 d1s7za_ not modelled 6.3 20 Fold:Another 3-helical bundle Superfamily:B-form DNA mimic Ocr Family:B-form DNA mimic Ocr 80 c2qniA_ not modelled 6.3 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu0299; PDBTitle: crystal structure of uncharacterized protein atu0299 81 d1nnla_ not modelled 6.3 27 Fold:HAD-like Superfamily:HAD-like Family:Phosphoserine phosphatase 82 c1no1C_ not modelled 6.1 30 PDB header:replication Chain: C: PDB Molecule:replisome organizer; PDBTitle: structure of truncated variant of b.subtilis spp1 phage g39p helicase2 loader/inhibitor protein 83 d1no1a_ not modelled 6.1 30 Fold:Replisome organizer (g39p helicase loader/inhibitor protein) Superfamily:Replisome organizer (g39p helicase loader/inhibitor protein) Family:Replisome organizer (g39p helicase loader/inhibitor protein) 84 c2l2dA_ not modelled 6.0 21 PDB header:hydrolase Chain: A: PDB Molecule:otu domain-containing protein 7a; PDBTitle: solution nmr structure of human uba-like domain of otud7a_11_83, nesg2 target ht6304a/ocsp target otud7a_11_83/sgc-toronto 85 c3fxeA_ not modelled 6.0 35 PDB header:unknown function Chain: A: PDB Molecule:protein icmq; PDBTitle: crystal structure of interacting domains of icmr and icmq (seleno-2 derivative) 86 d1vcoa2 not modelled 5.7 26 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 87 c1q6xA_ not modelled 5.6 30 PDB header:transferase Chain: A: PDB Molecule:choline o-acetyltransferase; PDBTitle: crystal structure of rat choline acetyltransferase 88 d2vo1a1 not modelled 5.5 38 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 89 d2q7sa1 not modelled 5.4 24 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:FGase-like 90 d1wr8a_ not modelled 5.4 12 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 91 c3fkeB_ not modelled 5.2 12 PDB header:rna binding protein Chain: B: PDB Molecule:polymerase cofactor vp35; PDBTitle: structure of the ebola vp35 interferon inhibitory domain 92 d1rkua_ not modelled 5.2 0 Fold:HAD-like Superfamily:HAD-like Family:Homoserine kinase ThrH 93 d1l6ra_ not modelled 5.2 22 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 94 d1huua_ not modelled 5.2 7 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 95 c3fvvA_ not modelled 5.1 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein with unknown function from2 bordetella pertussis tohama i 96 d1u02a_ not modelled 5.1 6 Fold:HAD-like Superfamily:HAD-like Family:Trehalose-phosphatase 97 c3l7yA_ not modelled 5.0 13 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein smu.1108c; PDBTitle: the crystal structure of smu.1108c from streptococcus mutans ua159