Return to main results Retrieve Phyre Job Id

Job DescriptionP18006
Confidence6.01%DateThu Jan 5 11:36:33 GMT 2012
Rank84Aligned Residues42
% Identity21%Templatec2l2dA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:otu domain-containing protein 7a; PDBTitle: solution nmr structure of human uba-like domain of otud7a_11_83, nesg2 target ht6304a/ocsp target otud7a_11_83/sgc-toronto
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.........90...
Predicted Secondary structure 




Query SS confidence 












































Query Sequence  AFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQ
Query Conservation   



 

  
  
 
   

 

  
 
 

  


 

     
Alig confidence 















...

























Template Conservation 















...
















 


 
 
 
Template Sequence  TLDMDAVLSDFVRSTG. . . AEPGLARDLLEGKNWDLTAALSDYEQ
Template Known Secondary structure  S


...

TTT
Template Predicted Secondary structure 

...







Template SS confidence 












































   24.....30......... 40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions