Job Description P18006 Confidence 8.55% Date Thu Jan 5 11:36:33 GMT 2012 Rank 62 Aligned Residues 63 % Identity 14% Template c1or7C_ PDB info PDB header:transcription Chain: C: PDB Molecule:sigma-e factor negative regulatory protein; PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea Resolution 2.00 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	Q	T	V	D	A	F	F	D	S	A	S	Q	K	Q	L	S	E	A	Q	S	K	A	L	S	A	R	F	N	T	A	L	E	A	S	L	Q	A	W	Q	Q	K	H	H	A	V	I	L	V	S	P	A	V	V	Q	G	A	P	D	I	S	R	E	I	Q	Q	D	I	A
Query Conservation
Alig confidence												.	.	.	.															.																	.	.
Template Conservation												.	.	.	.															.																	.	.
Template Sequence		Q	K	E	Q	L	S	A	L	M	D	.	.	.	.	G	E	T	L	D	S	E	L	L	N	E	L	A	H	.	N	P	E	M	Q	K	T	W	E	S	Y	H	L	I	R	D	.	.	S	M	R	G	D	T	P	E	V	L	H	F	D	I	S	S	R	V	M	A	A	I	E
Template Known Secondary structure											T	.	.	.	.	T	S												T	.																	.	.				T				S	S			S
Template Predicted Secondary structure												.	.	.	.															.																	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions