Job Description P76264 Confidence 6.38% Date Thu Jan 5 12:21:21 GMT 2012 Rank 9 Aligned Residues 89 % Identity 6% Template c3hfxA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:l-carnitine/gamma-butyrobetaine antiporter; PDBTitle: crystal structure of carnitine transporter Resolution 3.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		I	T	A	T	V	L	L	A	F	G	M	S	M	D	A	F	A	A	S	I	G	K	G	.	.	.	A	T	L	H	K	P	K	F	S	E	A	L	R	T	G	L	I	F	G	A	V	E	T	L	T	P	L	I	G	W	G	M	G	M	L	A	S	R	F	V	L	E	W	N	H	W	I	A	F	V	L	L	I	F
Query Conservation																									.	.	.
Alig confidence																									.	.	.																																												.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		I	L	C	F	I	A	T	V	T	L	V	N	A	C	S	Y	T	L	A	M	S	T	C	R	E	V	R	D	G	E	E	P	P	L	L	V	R	I	G	W	S	I	L	V	G	I	I	G	I	V	L	L	A	L	G	G	L	K	P	I	Q	T	A	I	I	A	G	G	C	.	.	.	.	P	L	F	F	V	N	I
Template Known Secondary structure																						T	T	S		S	S	S	S	S		S	S		S	T	T																				S	S													.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.					.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	R	M	I	I	E	G	F	R	G	A	D	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	V	T	L	S	F	I	K	D	A	K	Q	N	W	K	D
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions