Job Description P76264 Confidence 1.57% Date Thu Jan 5 12:21:21 GMT 2012 Rank 35 Aligned Residues 85 % Identity 11% Template c2wwbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome Resolution 6.48 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	D	E	D	E	E	P	R	R	R	H	G	F	W	L	L	V	T	T	A	I	A	T	S	L	D	A	M	A	V	G	V	G	L	A	F	L	Q	V	N	I	I	A	T	A	L	A	I	G	C	A	T	L	I	M	S	T	L	G	M	M	V	G	R	F	I	G	S	I	I	G	K	K	A	E	I	L	G
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		E	V	G	D	T	P	K	D	R	A	L	F	N	G	A	Q	K	L	F	G	M	I	I	T	I	.	.	.	G	Q	S	I	V	Y	V	M	T	G	M	Y	G	D	P	S	E	M	G	A	G	I	C	L	L	I	T	I	Q	L	F	V	A	G	L	I	V	L	L	L	D	E	L	L	Q	K	G	Y	G	L	G	S
Template Known Secondary structure		S			S	S	S	S		S	S																.	.	.										T	S	S			S	S		S																												T	T	T		S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	V	L	I	G	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	S	L	F	I	A	T
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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