Job Description P33354 Confidence 3.98% Date Thu Jan 5 11:51:55 GMT 2012 Rank 37 Aligned Residues 45 % Identity 16% Template c3pptA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:sodium-calcium exchanger; PDBTitle: rep1-nxsq fatty acid transporter Resolution 1.28 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	G	T	E	I	A	I	T	Y	V	Y	K	G	D	K	V	L	K	Q	S	S	E	T	K	I	Q	F	A	S	I	G	A	T	T	K	E	D	A	A	K	T	L	E	P	L	S	A	K	Y	K	N	I	A	G	V	E	E	K	L	T	Y	T	D	T	Y	A	Q	E	N	V	T	I	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	G	R	K	I	K	T	T	C	K	I	D	G	N	A	M	I	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	G	S	P	D	S	I	L	S	R	E	V	K	D	G	K	M	H	M	I	L	K	V	N
Template Known Secondary structure		T	T												T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S										T	T									T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																														.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions