Job Description P33354 Confidence 8.43% Date Thu Jan 5 11:51:55 GMT 2012 Rank 11 Aligned Residues 20 % Identity 15% Template c3dshA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:interferon regulatory factor 5; PDBTitle: crystal structure of dimeric interferon regulatory factor 5 (irf-5)2 transactivation domain Resolution 2.00 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	A	I	T	Y	V	Y	K	G	D	K	V	L	K	Q	S	S	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	E	I	K	F	Q	Y	R	G	R	P	P	R	A	L	T	I	S	N
Template Known Secondary structure										T	T	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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