Return to main results Retrieve Phyre Job Id

Job DescriptionP33354
Confidence3.11%DateThu Jan 5 11:51:55 GMT 2012
Rank51Aligned Residues19
% Identity21%Templatec2waqQ_
PDB info PDB header:transcriptionChain: Q: PDB Molecule:dna-directed rna polymerase rpo13 subunit; PDBTitle: the complete structure of the archaeal 13-subunit dna-2 directed rna polymerase
Resolution3.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   67..70.........80.....
Predicted Secondary structure 



Query SS confidence 


















Query Sequence  GATTKEDAAKTLEPLSAKY
Query Conservation 
   

 

   
     
Alig confidence 


















Template Conservation   










 
    
Template Sequence  GKISVDEAKRLFEDNYKDY
Template Known Secondary structure 
SSSTTT
Template Predicted Secondary structure 



Template SS confidence 


















   57..60.........70.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions