Return to main results Retrieve Phyre Job Id

Job DescriptionC3UPD1
Confidence3.05%DateThu Jan 5 10:56:22 GMT 2012
Rank95Aligned Residues29
% Identity21%Templatec2gu1A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:zinc peptidase; PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40..... ....50.......
Predicted Secondary structure 




......

Query SS confidence 
















. . . . . .











Query Sequence  GWEVKSLRAGKANISDS. . . . . . YVLLRDGEAFLF
Query Conservation 
 





 
   
 

......
  
   
  
 
Alig confidence 
















......











Template Conservation 



 
   
 
  

   


  


 

 
  
Template Sequence  GAPVYSTGDGKVIVVRKHPYAGNYLVIEHNSVYKT
Template Known Secondary structure  T

SSSTTT
SSS
Template Predicted Secondary structure 













Template SS confidence 


































   242.......250.........260.........270......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions