Job Description P75745 Confidence 100.00% Date Thu Jan 5 12:13:41 GMT 2012 Rank 2 Aligned Residues 269 % Identity 35% Template c3oepA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative uncharacterized protein ttha0988; PDBTitle: crystal structure of ttha0988 in space group p43212 Resolution 1.75 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	I	I	R	A	G	M	Y	T	T	V	Q	D	G	G	R	H	G	F	R	Q	S	G	I	S	H	C	G	A	L	D	M	P	A	L	R	I	A	N	L	L	V	G	N	D	A	N	A	P	A	L	E	I	T	L	G	Q	L	T	V	E	F	E	T	D	G	W	F	A	L	T	G	A	G	C	E	A	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	E	E	P	G	L	M	D	L	V	V	D	G	G	R	F	L	G	G	H	L	G	L	A	R	S	G	P	L	D	A	P	S	A	R	L	A	N	R	L	V	G	N	G	A	G	A	P	L	L	E	F	A	Y	K	G	P	V	L	T	A	L	R	D	L	V	A	A	F	A	G	Y	G	F	V	A	L	L
Template Known Secondary structure									S	S						S				S		G	G	G	T					S		S	S											T	T			T	T	S							S	S							S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	N	A	V	W	T	G	W	R	L	P	M	K	A	G	Q	R	L	T	L	K	R	P	Q	H	G	M	R	S	Y	L	A	V	A	G	G	I	D	V	P	P	V	M	G	S	C	S	T	D	L	K	V	G	I	G	G	L	E	G	R	L	L	K	D	G	D	R	L	P	I	G	K	S	K	R	D	S	M	E
Query Conservation
Alig confidence																																																									.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		E	G	E	E	I	P	P	G	Q	S	F	L	W	P	R	G	K	T	L	R	F	R	P	R	G	P	G	V	R	G	Y	L	A	V	A	G	G	L	E	V	R	P	F	L	G	S	A	S	P	D	L	R	G	R	I	.	.	.	.	G	R	P	L	W	A	G	D	V	L	G	L	E	A	L	R	P	V	R	P	G
Template Known Secondary structure		T	T					S	S							T	T									S	S									T	T		B					B	T	T	B				B	T	T	T	T	B	.	.	.	.	S					T	T					B	S	S						S
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.					.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		162	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	Q	G	V	.	K	Q	L	L	W	G	N	R	I	R	A	L	P	G	P	E	Y	H	E	F	D	R	A	S	Q	D	A	F	W	R	S	P	W	Q	L	S	S	Q	S	N	R	M	G	Y	R	L	Q	G	Q	I	L	K	R	T	T	D	R	E	L	L	S	H	G	L	L	P	G	V	V	Q	V	P	H	N	G
Query Conservation						.
Alig confidence						.																	.	.	.																		.																.	.	.
Template Conservation																							.	.	.																		.																.	.	.
Template Sequence		R	A	F	P	Q	R	P	L	P	E	A	F	R	L	R	L	L	P	G	P	Q	.	.	.	F	A	G	E	A	F	R	A	L	C	S	G	P	F	R	V	A	.	R	A	D	R	V	G	V	E	L	L	G	P	E	V	P	.	.	.	G	G	E	G	L	S	E	P	T	P	L	G	G	V	Q	V	P	P	S	G
Template Known Secondary structure			B								S	S									T	T	.	.	.										T	S	S						.				S	S						S	S				.	.	.											T	T						S	S	S
Template Predicted Secondary structure																							.	.	.																		.																.	.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.				400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.				.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	I	V	L	M	N	D	A	Q	T	T	G	G	Y	P	R	I	A	C	I	I	E	A	D	M	Y	H	L	A	Q	I	P	L	G	Q	P	I	H	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	L	V	L	L	A	D	K	G	S	L	G	G	Y	A	K	P	A	L	V	D	P	R	D	L	W	L	L	G	Q	A	R	P	G	V	E	I	H	F	T
Template Known Secondary structure								T	T			S												G	G	G					T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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