 |
Job Description | P75745 | Confidence | 13.18% | Date | Thu Jan 5 12:13:41 GMT 2012 |
Rank | 87 | Aligned Residues | 30 |
% Identity | 17% | Template | c2vgmA_ |
PDB info |
PDB header:cell cycle | Chain: A: PDB Molecule:dom34; |
PDBTitle: structure of yeast dom34 : a protein related to translation2 termination factor erf1 and involved in no-go decay.
|
Resolution | 2.6 Å |
|
  |   |
253 | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | |
. | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | Y | P | R | I | A | C | I | I | E | A | D | M | Y | H | L | A | Q | I | . |
P | L | G | Q | P | I | H | F | V | Q |
Query Conservation |   |
|
|
|
|   |
|   |   |
|   |   |   |
|
|   |   |
|
|
|   | . |   |
|
|   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|
|   |   |
|
|
|
|   |
|   |
|
|
|   |   |
|
|   |
|   |   |   |   |
Template Sequence |   |
G | A | V | I | T | L | L | P | E | D | K | E | D | L | F | T | V | Y | Q | I | V | D | K | D | D | E | L | I | F | K | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|