Job Description P75745 Confidence 97.33% Date Thu Jan 5 12:13:41 GMT 2012 Rank 3 Aligned Residues 254 % Identity 8% Template c2qf7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase protein; PDBTitle: crystal structure of a complete multifunctional pyruvate carboxylase2 from rhizobium etli Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.
Predicted Secondary structure											.																																								.	.	.	.	.																							.
Query SS confidence											.																																								.	.	.	.	.																							.
Query Sequence		A	G	M	Y	T	T	V	Q	D	.	G	G	R	H	G	F	R	Q	S	G	I	S	H	C	G	A	L	D	M	P	A	L	R	I	A	N	L	L	V	G	N	D	A	N	A	P	A	L	E	.	.	.	.	.	I	T	L	G	Q	L	T	V	E	F	E	T	D	G	W	F	A	L	T	G	A	G	.	C	E	A
Query Conservation											.																																								.	.	.	.	.																							.
Alig confidence											.																																								.	.	.	.	.									.	.													.
Template Conservation																																																																.	.
Template Sequence		V	K	R	Q	D	R	A	T	K	L	L	T	Y	L	A	D	V	T	V	N	G	H	P	E	A	K	D	R	P	K	P	L	E	N	A	A	R	P	V	V	P	Y	A	G	N	G	V	K	D	G	T	K	Q	L	L	D	T	L	G	P	K	K	.	.	F	G	E	W	M	R	N	E	K	R	V	L	L	T	D	T
Template Known Secondary structure																								T	T	T	T	T	S					S	S												S																	.	.									S	S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.			.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	D	D	N	A	V	W	T	G	W	R	L	P	M	K	A	G	Q	R	L	T	L	K	R	P	Q	H	G	M	R	S	Y	L	A	V	A	G	G	I	D	V	P	P	V	M	G	S	C	S	T	D	L	K	V	G	I	G	G	L	E	G	R	L	L	K	D	G	D	R	L	P	I	G	K	S	K	R	D	S
Query Conservation
Alig confidence													.												.	.	.	.	.	.																				.														.	.	.	.
Template Conservation													.												.	.	.	.	.	.																				.														.	.	.	.
Template Sequence		T	M	R	D	G	H	Q	S	L	L	A	.	T	R	M	R	T	Y	D	I	A	R	I	.	.	.	.	.	.	A	G	T	Y	S	H	A	L	P	N	L	L	S	L	E	C	W	G	G	.	A	T	F	D	V	S	M	R	F	L	T	E	D	.	.	.	.	P	W	E	R	L	A	L	I	R	E	G	A	P	N
Template Known Secondary structure		T	T	T								T	.	T											.	.	.	.	.	.									T	T		S							T	.	T													.	.	.	.													T	T
Template Predicted Secondary structure													.												.	.	.	.	.	.																				.														.	.	.	.
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.		.	.	.	560	.	.	.	.	.	.	.							.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.		.	.	.	590	.	.	.	.	.	.	.	.	.					600	.	.	.	.	.	.	.	.	.	610	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	A	Q	G	V	K	Q	L	L	W	G	N	R	I	R	A	L	P	G	P	E	Y	H	E	F	D	R	A	S	Q	D	A	F	W	R	S	P	W	Q	L	S	S	Q	S	N	R	M	G	Y	R	L	Q	G	Q	I	L	K	R	T	T	D	R	E	L	L	S	H	G	L	L	P	G	V	V	Q	V	P	H	N
Query Conservation
Alig confidence																																											.	.	.
Template Conservation																																											.	.	.
Template Sequence		L	L	L	Q	M	L	L	R	G	A	N	G	V	G	Y	T	N	Y	P	D	N	V	V	K	Y	F	V	R	Q	A	A	K	G	G	I	D	L	F	R	V	F	.	.	.	D	C	L	N	W	V	E	N	M	R	V	S	M	D	A	I	A	E	E	N	K	L	C	E	A	A	I	C	Y	T	G	D	I	L	N	S
Template Known Secondary structure		S								T	T	T	B	T		S	S																		T								.	.	.		T	T			G	G	G	G										T	T											S		T	T		T
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.				.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		G	Q	P	I	V	L	M	N	D	A	Q	T	T	G	G	Y	P	R	I	A	C	I	I	E	A	D	M	Y	H	L	.	.	.	A	Q	I	P	L	G	Q	P	I	H	F
Query Conservation																																.	.	.
Alig confidence						.	.	.																								.	.	.
Template Conservation						.	.	.
Template Sequence		A	R	P	K	.	.	.	Y	D	L	K	Y	Y	T	N	L	A	V	E	L	E	K	A	G	A	H	I	I	A	V	D	M	A	G	L	L	K	P	A	A	A	K	V	L
Template Known Secondary structure		T	S	G	G	.	.	.	G															T	T		S						T	T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		691	.	.	.				.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions