Job Description P31660 Confidence 100.00% Date Thu Jan 5 11:48:24 GMT 2012 Rank 17 Aligned Residues 358 % Identity 23% Template d2ctsa_ SCOP info Citrate synthase Citrate synthase Citrate synthase Resolution 2.00

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.
Query Sequence		H	V	I	K	P	K	K	S	V	A	L	S	G	V	P	A	G	N	T	A	L	C	T	V	G	K	S	G	N	D	L	H	Y	R	G	Y	D	I	L	D	L	A	.	.	.	.	.	.	.	.	.	K	H	C	E	F	E	E	V	A	H	L	L	I	H	G	K	L	P	T	R	D	E	L	A	A	Y	K	T	K
Query Conservation																																												.	.	.	.	.	.	.	.	.
Alig confidence																															.													.	.	.	.	.	.	.	.	.
Template Conservation																															.
Template Sequence		Q	I	T	V	D	M	M	Y	G	G	M	R	G	M	K	G	L	V	Y	E	T	S	V	L	D	P	D	E	G	.	I	R	F	R	G	Y	S	I	P	E	C	Q	K	M	L	P	K	A	K	G	G	E	E	P	L	P	E	G	L	F	W	L	L	V	T	G	Q	I	P	T	E	E	Q	V	S	W	L	S	K	E
Template Known Secondary structure										T	T	S	T	T								S					T	T	T		.			S	S	S		B								S		B		S	S		S	S	B												S	S
Template Predicted Secondary structure																															.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		L	K	A	L	R	G	L	P	A	N	V	R	T	V	L	E	A	L	P	A	A	S	H	P	M	D	V	M	R	T	G	V	S	A	L	G	C	T	L	P	.	.	.	.	.	.	.	.	E	K	E	G	H	T	V	S	G	A	R	D	I	A	D	K	L	L	A	S	L	S	S	I	L	L	Y	W	Y	H	Y	S
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	A	K	R	A	A	L	P	S	H	V	V	T	M	L	D	N	F	P	T	N	L	H	P	M	S	Q	L	S	A	A	I	T	A	L	N	S	E	S	N	F	A	R	A	Y	A	E	G	I	H	R	T	K	Y	W	E	L	I	Y	E	D	C	M	D	L	I	A	K	L	P	C	V	A	A	K	I	Y	R	N	L
Template Known Secondary structure					T																S	S	S													G	G	G	G									T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
			155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.																																																.
Query SS confidence		.																																																.
Query Sequence		.	H	N	G	E	R	I	Q	P	E	T	D	D	D	S	I	G	G	H	F	L	H	L	L	H	G	E	K	P	S	Q	S	W	E	K	A	M	H	I	S	L	V	L	Y	A	E	H	E	.	F	N	A	S	T	F	T	S	R	V	I	A	G	T	G	S	D	M	Y	S	A	I	I	G	A	I	G	A	L	R	G
Query Conservation		.																																																.
Alig confidence		.																										.	.																					.
Template Conservation																												.	.
Template Sequence		Y	R	E	G	S	S	I	G	A	I	D	S	K	L	D	W	S	H	N	F	T	N	M	L	G	Y	.	.	T	D	A	Q	F	T	E	L	M	R	L	Y	L	T	I	H	S	D	H	E	G	G	N	V	S	A	H	T	S	H	L	V	G	S	A	L	S	D	P	Y	L	S	F	A	A	A	M	N	G	L	A	G
Template Known Secondary structure			S	T	T								T	T	S											T		.	.																T	S			T	T	T	S											T	T	T															T	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.								250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		P	K	H	G	G	A	N	E	V	S	L	E	I	Q	Q	R	Y	.	.	.	.	.	.	.	E	T	P	D	E	A	E	A	D	I	R	K	R	V	E	N	K	E	V	V	I	G	F	G	H	P	V	Y	T	I	A	D	P	R	H	Q	V	I	K	R	V	A	K	Q	L	S	Q	E	G	G	S	L	K	M	Y	N
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																																																		.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		P	L	H	G	L	A	N	Q	E	V	L	V	W	L	T	Q	L	Q	K	E	V	G	K	D	V	S	D	E	K	L	R	D	Y	I	W	N	T	L	N	S	G	R	V	V	P	G	Y	G	H	A	V	L	R	K	T	D	P	R	Y	T	C	Q	R	E	F	A	L	K	H	L	P	H	D	.	.	.	P	M	F	K
Template Known Secondary structure		T	T	T	T	T																T		S	S																T	T				T	T	B			S	S			S																	T	T		.	.	.
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.								.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.																						.																												.
Query SS confidence														.	.	.	.	.	.	.																						.																												.
Query Sequence		I	A	D	R	L	E	T	V	M	W	E	S	.	.	.	.	.	.	.	K	K	M	F	P	N	L	D	W	F	S	A	V	S	Y	N	M	M	G	V	P	.	T	E	M	F	T	P	L	F	V	I	A	R	V	T	G	W	A	A	H	I	I	E	Q	R	Q	D	N	.	K	I	I	R	P	S	A	N	Y	V
Query Conservation														.	.	.	.	.	.	.																						.																												.
Alig confidence														.	.	.	.	.	.	.																						.																												.
Template Conservation
Template Sequence		L	V	A	Q	L	Y	K	I	V	P	N	V	L	L	E	Q	G	K	A	K	N	P	W	P	N	V	D	A	H	S	G	V	L	L	Q	Y	Y	G	M	T	E	M	N	Y	Y	T	V	L	F	G	V	S	R	A	L	G	V	L	A	Q	L	I	W	S	R	A	L	G	F	P	L	E	R	P	K	S	M	S	T
Template Known Secondary structure																	T	T			S			S	B		T											T	T				G	G	G																							T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions