Job Description P31660 Confidence 100.00% Date Thu Jan 5 11:48:24 GMT 2012 Rank 2 Aligned Residues 382 % Identity 30% Template d1k3pa_ SCOP info Citrate synthase Citrate synthase Citrate synthase Resolution 2.20

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	T	I	L	Q	N	S	T	H	V	I	K	P	K	K	S	V	A	L	S	G	V	P	A	G	N	T	A	L	C	T	V	G	K	S	G	N	D	L	H	Y	R	G	Y	D	I	L	D	L	A	K	H	C	E	F	E	E	V	A	H	L	L	I	H	G	K	L	P	T	R	D	E	L	A	A	Y	K	T	K
Query Conservation
Alig confidence							.							.	.
Template Conservation							.							.	.
Template Sequence		D	I	R	T	L	.	G	S	K	G	V	F	.	.	T	F	D	P	G	F	T	S	T	A	S	C	E	S	K	I	T	F	I	D	G	D	E	G	I	L	L	H	R	G	F	P	I	D	Q	L	A	T	D	S	N	Y	L	E	V	C	Y	I	L	L	N	G	E	K	P	T	Q	E	Q	Y	D	E	F	K	T	T
Template Known Secondary structure				T	T	T	.	T	T	T	T			.	.				T	T		T	T							S	S					T	T	T	T					T	T										S												S	S
Template Predicted Secondary structure							.							.	.
Template SS confidence
		30	.	.	.	.		.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		L	K	A	L	R	G	L	P	A	N	V	R	T	V	L	E	A	L	P	A	A	S	H	P	M	D	V	M	R	T	G	V	S	A	L	G	C	T	L	P	E	K	E	G	H	T	.	V	S	G	A	R	D	I	A	D	K	L	L	A	S	L	S	S	I	L	L	Y	W	Y	H	Y	S	H	N	G	E	R	I	Q
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		V	T	R	H	T	M	I	H	E	Q	I	T	R	L	F	H	A	F	R	R	D	S	H	P	M	A	V	M	C	G	I	T	G	A	L	A	A	F	Y	H	D	S	L	D	V	N	N	P	R	H	R	E	I	A	A	F	R	L	L	S	K	M	P	T	M	A	A	M	C	Y	K	Y	S	I	G	Q	P	F	V	Y
Template Known Secondary structure				T	T		S			T	T	T					T	T	S		T	T	S											T	T						G	G	G			T	T																													T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		P	E	T	D	D	D	S	I	G	G	H	F	L	H	L	L	H	G	E	.	.	.	.	.	K	P	S	Q	S	W	E	K	A	M	H	I	S	L	V	L	Y	A	E	H	E	F	N	A	S	T	F	T	S	R	V	I	A	G	T	G	S	D	M	Y	S	A	I	I	G	A	I	G	A	L	R	G	P	K	H	G
Query Conservation																					.	.	.	.	.
Alig confidence			.																		.	.	.	.	.
Template Conservation			.
Template Sequence		P	.	R	N	D	L	S	Y	A	G	N	F	L	N	M	M	F	S	T	P	C	E	P	Y	E	V	N	P	I	L	E	R	A	M	D	R	I	L	I	L	H	A	D	H	E	Q	N	A	S	T	S	T	V	R	T	A	G	S	S	G	A	N	P	F	A	C	I	A	A	G	I	A	S	L	W	G	P	A	H	G
Template Known Secondary structure			.		T	T	S													B	T	T	B																		T	T	S			S	S													T	T																				S
Template Predicted Secondary structure			.
Template SS confidence
		187		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																	.	.																																	.
Query SS confidence																																	.	.																																	.
Query Sequence		G	A	N	E	V	S	L	E	I	Q	Q	R	Y	E	T	P	D	E	A	E	A	D	I	R	K	R	V	E	N	K	E	.	.	V	V	I	G	F	G	H	P	V	Y	T	I	A	D	P	R	H	Q	V	I	K	R	V	A	K	Q	L	S	Q	E	G	G	.	S	L	K	M	Y	N	I	A	D	R	L	E	T	V
Query Conservation																																	.	.																																	.
Alig confidence																																	.	.																																	.
Template Conservation
Template Sequence		G	A	N	E	A	A	L	K	M	L	E	E	I	S	S	V	K	H	I	P	E	F	F	R	R	A	K	D	K	N	D	S	F	R	L	M	G	F	G	H	R	V	Y	K	N	Y	D	P	R	A	T	V	M	R	E	T	C	H	E	V	L	K	E	L	G	T	K	D	D	L	L	E	V	A	M	E	L	E	N	I
Template Known Secondary structure		S		T	T	T	T	T	G	G	G	S	T	T	S	S	S	T	T	S	T	T	T	T	S	T	T	T			S	S			T	T	T	T	B			S	S		S	S			T	T													T	T	S		T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		314						.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.																																																				.
Query SS confidence			.	.	.	.	.																																																				.
Query Sequence		M	.	.	.	.	.	W	E	S	K	K	M	F	P	N	L	D	W	F	S	A	V	S	Y	N	M	M	G	V	P	T	E	M	F	T	P	L	F	V	I	A	R	V	T	G	W	A	A	H	I	I	E	Q	R	Q	D	N	.	K	I	I	R	P	S	A	N	Y	V	G	P	E	D	R	P	F	V	A	L	D	K
Query Conservation			.	.	.	.	.																																																				.
Alig confidence			.	.	.	.	.																																																				.
Template Conservation
Template Sequence		A	L	N	D	P	Y	F	I	E	K	K	L	Y	P	N	V	D	F	Y	S	G	I	I	L	K	A	M	G	I	P	S	S	M	F	T	V	I	F	A	M	A	R	T	V	G	W	I	A	H	W	S	E	M	H	S	D	G	M	K	I	A	R	P	R	Q	L	Y	T	G	Y	E	K	R	D	F	K	S	D	I	K
Template Known Secondary structure											T	T			B													T	T			G	G	G																							T	T												S			S						S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		388
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		426

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions