Job Description P31660 Confidence 4.07% Date Thu Jan 5 11:48:24 GMT 2012 Rank 91 Aligned Residues 65 % Identity 11% Template c3i5qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:nucleoporin nup170; PDBTitle: nup170(aa1253-1502) at 2.2 a, s.cerevisiae Resolution 2.20 Å

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		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		H	Q	V	I	K	R	V	A	K	Q	L	S	Q	E	G	G	S	L	K	M	Y	N	I	A	D	R	L	E	T	V	M	W	E	S	K	K	M	F	P	N	L	D	W	F	S	A	V	S	Y	N	M	M	G	V	P	T	E	.	M	F	T	P	L	F	V	I
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		S	N	V	L	I	K	I	G	K	N	V	Q	D	S	E	F	I	F	P	I	F	E	L	F	P	I	V	C	N	F	F	Y	E	T	L	P	K	E	H	I	V	S	G	S	I	V	S	I	F	I	T	A	G	V	S	F	N	K	M	Y	Y	I	L	K	E	L
Template Known Secondary structure													T	T		T	T	T	S																	S		G	G	G			T	T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		1368	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions