Job Description P31660 Confidence 100.00% Date Thu Jan 5 11:48:24 GMT 2012 Rank 14 Aligned Residues 354 % Identity 38% Template c2p2wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:citrate synthase; PDBTitle: crystal structure of citrate synthase from thermotoga maritima msb8 Resolution 1.90 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	A	L	S	G	V	P	A	G	N	T	A	L	C	T	V	G	K	S	G	N	D	L	H	Y	R	G	Y	D	I	L	D	L	A	K	H	C	E	F	E	E	V	A	H	L	L	I	H	G	K	L	P	T	R	D	E	L	A	A	Y	K	T	K	L	K	A	L	R	G	L	P	A	N	V	R	T	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	K	G	L	E	G	V	K	I	C	E	S	S	I	C	Y	L	D	G	I	N	G	R	L	Y	Y	R	G	I	P	V	E	E	L	A	E	K	S	T	F	E	E	T	A	Y	F	L	W	Y	G	K	L	P	T	K	S	E	L	E	E	F	K	R	K	M	A	D	Y	R	E	L	P	A	E	A	L	G	I	L
Template Known Secondary structure				T	T		T	T							S	S					T	T	T	T					T	T																						S	S																	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	P	A	A	S	H	P	M	D	V	M	R	T	G	V	S	A	L	G	C	T	L	P	E	K	E	G	H	T	V	S	G	A	R	D	I	A	D	K	L	L	A	S	L	S	S	I	L	L	Y	W	Y	H	Y	S	H	N	G	E	R	I	Q	P	E	T	D	D	D	S	I	G	G	H	F	L	H	L	L
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Sequence		Y	H	L	P	K	N	L	H	Y	I	D	V	L	K	I	F	L	S	I	.	.	.	.	.	.	.	.	.	.	.	.	H	E	D	L	R	E	K	A	I	R	V	A	S	V	F	P	T	I	L	A	Y	Y	Y	R	Y	S	K	G	K	E	L	I	R	P	.	R	K	D	L	S	H	V	E	N	F	Y	Y	M	M
Template Known Secondary structure		T	T	S		S													S		.	.	.	.	.	.	.	.	.	.	.	.																											T	T							.		T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100													.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	E	K	P	S	Q	S	W	E	K	A	M	H	I	S	L	V	L	Y	A	E	H	E	F	N	A	S	T	F	T	S	R	V	I	A	G	T	G	S	D	M	Y	S	A	I	I	G	A	I	G	A	L	R	G	P	K	H	G	G	A	N	E	V	S	L	E	I	Q	Q	R	Y	E	T	P	D	E	A	E	A
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		F	G	E	R	N	E	K	.	.	I	R	L	L	E	S	A	F	I	L	L	M	E	Q	D	I	N	A	S	T	F	A	A	L	V	I	A	S	T	L	S	D	L	Y	S	C	I	V	G	A	L	G	A	L	K	G	P	L	H	G	G	A	S	E	K	V	P	P	M	L	E	E	I	G	S	E	D	R	V	E	E
Template Known Secondary structure			S				T	T	.	.												S			S	S												T	T	T																S	T	T	T	T	T														S	G	G	G
Template Predicted Secondary structure									.	.
Template SS confidence
		156	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		D	I	R	K	R	V	E	N	K	E	V	V	I	G	F	G	H	P	V	Y	T	I	A	D	P	R	H	Q	V	I	K	R	V	A	K	Q	L	S	Q	E	G	G	S	L	K	M	Y	N	I	A	D	R	L	E	T	V	M	W	.	.	E	S	K	K	M	F	P	N	L	D	W	F	S	A	V	S	Y	N	M	M
Query Conservation																																																												.	.
Alig confidence																																											.	.	.															.	.
Template Conservation																																											.	.	.
Template Sequence		F	V	Q	K	C	L	K	E	K	R	K	I	M	G	F	G	H	R	V	Y	K	T	Y	D	P	R	A	V	F	L	K	R	V	L	Q	E	H	F	P	D	S	.	.	.	K	L	F	R	I	A	S	K	L	E	E	Y	I	V	S	N	K	I	K	N	I	Y	P	N	V	D	L	Y	S	S	V	L	F	E	E	L
Template Known Secondary structure										T				T	T	B			S	S		S	S																	T	T		.	.	.																T	T	G	G	G			B													T
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.				.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	P	T	E	M	F	T	P	L	F	V	I	A	R	V	T	G	W	A	A	H	I	I	E	Q	R	Q	D	N	K	I	I	R	P	S	A	N	Y	V	G	P	E	D	R	P	F	V	A	L	D	K	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	P	R	N	M	F	T	A	L	F	A	T	A	R	V	V	G	W	T	A	H	V	I	E	Y	V	S	D	N	K	L	I	R	P	T	S	E	Y	V	G	P	M	D	V	E	Y	I	P	I	E	R	R	D
Template Known Secondary structure		T			G	G	G																						T	T												S			S						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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