Job Description P31660 Confidence 100.00% Date Thu Jan 5 11:48:24 GMT 2012 Rank 4 Aligned Residues 383 % Identity 34% Template c2ibpB_ PDB info PDB header:transferase Chain: B: PDB Molecule:citrate synthase; PDBTitle: crystal structure of citrate synthase from pyrobaculum aerophilum Resolution 1.60 Å

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		4	.	.	.	.	.	10	.	.	.	.		.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure													.				.	.
Query SS confidence													.				.	.
Query Sequence		T	T	I	L	Q	N	S	T	H	V	I	.	K	P	K	.	.	K	S	V	A	L	S	G	V	P	A	G	N	T	A	L	C	T	V	G	K	S	G	N	D	L	H	Y	R	G	Y	D	I	L	D	L	A	K	H	C	E	F	E	E	V	A	H	L	L	I	H	G	K	L	P	T	R	D	E	L	A	A	Y	K
Query Conservation													.				.	.
Alig confidence													.				.	.
Template Conservation
Template Sequence		T	V	Q	V	K	T	T	G	K	I	L	Q	S	P	C	G	P	I	I	H	G	L	E	D	V	L	I	K	S	T	S	I	S	D	I	D	G	E	K	G	I	L	W	Y	R	G	Y	R	I	E	E	L	A	R	L	S	T	Y	E	E	V	S	Y	L	I	L	Y	G	R	L	P	T	K	R	E	L	E	D	Y	I
Template Known Secondary structure								S	S						T	T					G	G	G	T	T							S	S					T	T	T	T					T	T																						S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.													.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	L	K	A	L	R	G	L	P	A	N	V	R	T	V	L	E	A	L	P	A	A	S	H	P	M	D	V	M	R	T	G	V	S	A	L	G	C	T	L	P	E	K	E	G	.	.	.	.	.	.	.	.	.	.	.	.	H	T	V	S	G	A	R	D	I	A	D	K	L	L	A	S	L	S	S	I	L	L
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		N	R	M	K	K	Y	R	E	L	H	P	A	T	V	E	V	I	R	N	L	A	K	.	A	H	P	M	F	A	L	E	A	A	V	A	A	E	G	A	Y	D	E	D	N	Q	K	L	I	E	A	L	S	V	G	R	Y	K	A	E	E	K	E	L	A	Y	R	I	A	E	K	L	V	A	K	M	P	T	I	V	A
Template Known Secondary structure								T	S												T	T	T	.	S																													T	T			S
Template Predicted Secondary structure																								.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	W	Y	H	Y	S	H	N	G	E	R	I	Q	P	E	T	D	D	D	S	I	G	G	H	F	L	H	L	L	H	G	E	K	P	S	Q	S	W	E	K	A	M	H	I	S	L	V	L	Y	A	E	H	E	F	N	A	S	T	F	T	S	R	V	I	A	G	T	G	S	D	M	Y	S	A	I	I	G	A	I	G
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		Y	H	Y	R	F	S	R	G	L	E	V	V	R	P	.	R	D	D	L	G	H	A	A	N	F	L	Y	M	M	F	G	R	E	P	D	P	L	A	S	R	G	I	D	L	Y	L	I	L	H	A	D	H	E	V	P	A	S	T	F	A	A	H	V	V	A	S	T	L	S	D	L	Y	S	S	V	A	A	A	I	A
Template Known Secondary structure								T	T							.		T	T	S												S	S																	T	S			S													T	T	T
Template Predicted Secondary structure																.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.
Predicted Secondary structure																																					.																																								.
Query SS confidence																																					.																																								.
Query Sequence		A	L	R	G	P	K	H	G	G	A	N	E	V	S	L	E	I	Q	Q	R	Y	E	T	P	D	E	A	E	A	D	I	R	K	R	V	.	E	N	K	E	V	V	I	G	F	G	H	P	V	Y	T	I	A	D	P	R	H	Q	V	I	K	R	V	A	K	Q	L	S	Q	E	G	G	S	L	K	.	M	Y	N	I
Query Conservation																																					.																																								.
Alig confidence																																					.																																								.
Template Conservation
Template Sequence		A	L	K	G	P	L	H	G	G	A	N	E	M	A	V	R	N	Y	L	E	I	G	T	P	A	K	A	K	E	I	V	E	A	A	T	K	P	G	G	P	K	L	M	G	V	G	H	R	V	Y	K	A	Y	D	P	R	A	K	I	F	K	E	F	S	R	D	Y	V	A	K	F	G	D	P	Q	N	L	F	A	I
Template Known Secondary structure				T	S	T	T	T	S																G	G	G								T	T	S	T	T					T	T	B			S	S		S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		307	.	.	310	.	.	.	.						.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		A	D	R	L	E	T	V	M	.	.	.	.	.	W	E	S	K	K	M	F	P	N	L	D	W	F	S	A	V	S	Y	N	M	M	G	V	P	T	E	M	F	T	P	L	F	V	I	A	R	V	T	G	W	A	A	H	I	I	E	Q	R	Q	D	N	K	I	I	R	P	S	A	N	Y	V	G	P	E	D	R	P
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		A	S	A	I	E	Q	E	V	L	S	H	P	Y	F	Q	Q	R	K	L	Y	P	N	V	D	F	W	S	G	I	A	F	Y	Y	M	G	I	P	Y	E	Y	F	T	P	I	F	A	M	S	R	V	V	G	W	V	A	H	V	L	E	Y	W	E	N	N	R	I	F	R	P	R	A	C	Y	I	G	P	H	D	L	Q
Template Known Secondary structure																		T	T			B		G	G	G	T									T			G	G	G																					G	G	G												S		S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		382	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	A	L	D	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	P	L	E	Q	R
Template Known Secondary structure					G	G	G
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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