Job Description P0A7L0 Confidence 100.00% Date Thu Jan 5 11:05:50 GMT 2012 Rank 1 Aligned Residues 231 % Identity 45% Template c3qoyA_ PDB info PDB header:ribosomal protein Chain: A: PDB Molecule:50s ribosomal protein l1; PDBTitle: crystal structure of ribosomal protein l1 from aquifex aeolicus Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		M	A	K	L	T	K	R	M	R	V	I	R	E	K	V	D	A	T	K	Q	Y	D	I	N	E	A	I	A	L	L	K	E	L	.	.	.	A	T	A	K	F	V	E	S	V	D	V	A	V	N	L	G	I	D	A	R	K	S	D	Q	N	V	R	G	A	T	V	L	P	H	G	T	G	R	S	V	R	V	A	V
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		M	A	R	R	G	K	K	Y	I	E	A	S	K	L	V	D	R	N	K	R	Y	T	L	E	E	A	V	D	L	L	K	K	M	E	E	V	L	Q	R	R	F	D	E	T	V	E	L	A	M	R	L	N	V	D	P	R	Y	A	D	Q	M	V	R	G	S	V	V	L	P	H	G	L	G	K	P	I	K	V	V	V
Template Known Secondary structure			T	T											T	S		T	T			B																			S	S											S			T	T	S	G	G	G									S				S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		F	T	Q	G	A	N	A	E	A	A	K	A	A	G	A	E	L	V	G	M	E	D	L	A	D	Q	I	.	K	K	G	E	M	N	F	D	V	V	I	A	S	P	D	A	M	R	V	V	G	Q	L	G	Q	V	L	G	P	R	G	L	M	P	N	P	K	V	G	T	V	T	P	N	V	A	E	A	V	K	N	A
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		F	A	E	G	E	Y	A	K	K	A	E	E	A	G	A	D	Y	V	G	G	D	E	L	I	N	K	I	L	K	E	E	W	T	D	F	D	V	A	I	A	T	P	E	M	M	P	K	V	A	K	L	G	R	I	L	G	P	R	G	L	M	P	S	P	K	T	G	T	V	T	T	N	V	E	Q	A	I	K	D	A
Template Known Secondary structure														T	T		S				S											T					S						T	T	T					G	G	G					G	G	G	T		S			G	G	G	T		B		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	G	Q	V	R	Y	R	N	D	K	N	G	I	I	H	T	T	I	G	K	V	D	F	D	A	D	K	L	K	E	N	L	E	A	L	L	V	A	L	K	K	A	K	P	T	Q	A	K	G	V	Y	I	K	K	V	S	I	S	T	T	M	G	A	G	V	A	V	D	Q	A	G	L	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	G	R	V	E	F	K	V	D	K	A	G	N	V	H	M	P	V	G	K	I	S	F	E	K	E	K	L	I	D	N	L	Y	A	A	I	D	A	V	V	R	A	K	P	P	G	A	K	G	Q	Y	I	K	N	M	A	V	S	L	T	M	S	P	S	V	K	L	D	I	N	E	V	L	K
Template Known Secondary structure			T	T								T	T	S									T	T	S																			T			T	T			S		S									T	T	S					B
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions