 |
Job Description | P0A7L0 | Confidence | 33.20% | Date | Thu Jan 5 11:05:50 GMT 2012 |
Rank | 21 | Aligned Residues | 65 |
% Identity | 15% | Template | c3nbmA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:pts system, lactose-specific iibc components; |
PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae.
|
Resolution | 1.30 Å |
|
 |
  |   |
71 | . | . | . | . | . | . | . | . | 80 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | V | R | V | A | V | F | T | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | N | A | E | A | A | K | A | A | G | A | E | L | V | G | M | E | D | L | A | D | Q | I | K | K | G | E | M | N | F | D | V | V | I | A | S | P | D | A | M | R | V | V | G | Q | L | G | Q | V | L | G | P | R | G |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|   |   |
|   |
|
|
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
Template Sequence |   |
K | E | L | K | V | L | V | L | C | A | G | S | G | T | S | A | Q | L | A | N | A | I | N | E | G | A | N | L | T | E | V | R | V | I | A | N | S | G | A | Y | G | A | H | Y | D | I | X | G | V | Y | D | L | I | I | L | A | P | Q | V | R | S | Y | Y | R | E | X | K | V | D | A | E | R | L | G |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  | T | T | S |
| T | T | T | G | G | G |
| S |  |  |  |  |
| G | G | G | G | G | G |  |  |  |  |  |  |  |  | T | T | T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
454 | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|