Job Description P0A7L0 Confidence 100.00% Date Thu Jan 5 11:05:50 GMT 2012 Rank 8 Aligned Residues 198 % Identity 31% Template c2zkr5_ PDB info PDB header:ribosomal protein/rna Chain: 5: PDB Molecule:60s ribosomal protein l10a; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																					.
Query SS confidence									.																					.
Query Sequence		D	I	N	E	A	I	A	.	L	L	K	E	L	A	T	A	K	F	V	E	S	V	D	V	A	V	N	L	.	G	I	D	A	R	K	S	D	Q	N	V	R	G	A	T	V	L	P	H	G	T	G	R	S	V	R	V	A	V	F	T	Q	G	A	N	A	E	A	A	K	A	A	G	A	E	L	V	G	M	E	D
Query Conservation									.																					.
Alig confidence									.																					.
Template Conservation
Template Sequence		E	I	E	N	A	V	S	R	A	L	E	D	A	P	E	R	N	F	R	E	T	V	D	L	A	V	N	L	R	D	L	D	L	N	D	P	S	N	R	V	D	E	S	V	V	L	P	A	G	T	G	Q	E	T	T	I	V	V	F	A	E	G	E	T	A	L	R	A	E	E	V	A	D	D	V	L	D	E	D	E
Template Known Secondary structure		T											T	S				S	S											S	S			T	T	T	T	T	T									S	S			S	S																				T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure						.	.	.	.	.	.																								.
Query SS confidence						.	.	.	.	.	.																								.
Query Sequence		L	A	D	Q	.	.	.	.	.	.	I	K	K	G	E	M	N	F	D	V	V	I	A	S	P	D	A	M	R	V	V	G	Q	.	L	G	Q	V	L	G	P	R	G	L	M	P	N	P	K	V	G	T	V	T	P	N	V	A	E	A	V	K	N	A	K	A	G	Q	V	R	Y	R	N	D	K	N	G	I	I	H
Query Conservation						.	.	.	.	.	.																								.
Alig confidence						.	.	.	.	.	.																								.																			.	.													.
Template Conservation																																																						.	.													.
Template Sequence		L	E	E	L	G	G	D	D	D	A	A	K	D	L	A	D	D	T	D	F	F	I	A	E	K	G	L	M	Q	D	I	G	R	Y	L	G	T	V	L	G	P	R	G	K	M	P	E	P	L	D	P	D	.	.	D	D	V	V	E	V	I	E	R	M	K	N	.	T	V	Q	L	R	S	G	E	R	R	T	F	H
Template Known Secondary structure						T	T													S						T	T	T								T								T								S	S	.	.	S											T	.							S	S	S	S
Template Predicted Secondary structure																																																						.	.													.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	I	G	K	V	D	F	D	A	D	K	L	K	E	N	L	E	A	L	L	V	A	L	K	K	A	K	P	T	Q	A	K	G	V	Y	I	K	K	V	S	I	S	T	T	M	G	A	G	V	A	V
Query Conservation
Alig confidence																																		.	.
Template Conservation																																		.	.
Template Sequence		T	R	V	G	A	E	D	M	S	A	E	N	I	A	D	N	I	D	V	I	L	R	R	L	H	A	D	L	E	K	G	P	.	.	L	N	I	D	T	V	Y	V	K	T	T	M	G	P	A	M	E	V
Template Known Secondary structure							T	T	S																		T	T	T				T	.	.	T	T									S	S	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions