Job Description P0A7L0 Confidence 16.80% Date Thu Jan 5 11:05:50 GMT 2012 Rank 29 Aligned Residues 49 % Identity 12% Template c2vhmI_ PDB info PDB header:ribosome Chain: I: PDB Molecule:50s ribosomal protein l11; PDBTitle: structure of pdf binding helix in complex with the ribosome2 (part 1 of 4) Resolution 3.74 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		G	Q	L	G	Q	V	L	G	P	R	G	L	M	P	N	P	K	V	G	T	V	T	P	N	V	A	E	A	V	K	N	A	K	A	G	.	.	.	Q	V	R	Y	R	N	D	K	N	G	I	I	H	T	T	I	G	K
Query Conservation																																					.	.	.
Alig confidence																			.	.	.	.															.	.	.
Template Conservation																			.	.	.	.
Template Sequence		P	P	V	G	P	A	L	G	Q	Q	G	V	N	I	M	E	F	.	.	.	.	C	K	A	F	N	A	K	T	D	S	I	E	K	G	L	P	I	P	V	V	I	T	V	Y	A	D	R	S	F	T	F	V	T	K	T
Template Known Secondary structure		S	S	S	S	T	T	T	T	T	T	T							.	.	.	.	T					T	T	T	T	T	S		S	S	S										S	S	S
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions