Job Description P00803 Confidence 11.46% Date Thu Jan 5 10:56:51 GMT 2012 Rank 84 Aligned Residues 64 % Identity 13% Template d1fftb2 SCOP info Transmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Resolution 3.50

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	N	M	F	A	L	I	L	V	I	A	T	L	V	T	G	I	L	W	C	V	D	K	F	F	F	A	P	K	R	R	E	R	Q	A	A	A	Q	A	A	A	G	D	S	L	D	K	A	T	L	K	K	V	A	P	K	P	G	W	L	E	T	G	A	S	V	F	P	V	L	A	I	V	L	I
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	S	L	I	L	T	A	F	G	L	M	L	I	V	V	I	P	A	I	L	M	A	V	G	F	A	W	K	Y	R	A	S	N	K	.	.	.	.	.	.	.	.	.	.	.	.	D	A	K	Y	S	P	N	W	S	H	S	N	K	V	E	A	V	V	W	T	V	P	I	L	I	I	I	F	L
Template Known Secondary structure													T	T	T	T	T	T								T	T	T	T	T	T	T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	T		S	S								S						T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.													.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions