Return to main results Retrieve Phyre Job Id

Job DescriptionP00803
Confidence53.64%DateThu Jan 5 10:56:51 GMT 2012
Rank13Aligned Residues22
% Identity45%Templated1ah9a_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110.........120.........130..
Predicted Secondary structure 

























Query SS confidence 




































Query Sequence  LLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIV
Query Conservation 
  

 




  

 
 
           
 




Alig confidence 













...............







Template Conservation 
  

 
 
    
...............
  




Template Sequence  ILTGDKVTVELTPY. . . . . . . . . . . . . . . DLSKGRIV
Template Known Secondary structure 

TT



SS...............
TT
Template Predicted Secondary structure 






...............



Template SS confidence 




































   46...50......... 60.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions