Return to main results Retrieve Phyre Job Id

Job DescriptionP45848
Confidence4.87%DateThu Jan 5 12:03:51 GMT 2012
Rank65Aligned Residues54
% Identity11%Templated1fftb2
SCOP infoTransmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.....230.........240.........250.........260.........270.......
Predicted Secondary structure 



















Query SS confidence 





















































Query Sequence  ALLSNASAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDV
Query Conservation 
                               
             

      
Alig confidence 





















































Template Conservation     
 
 

 
     
      
   
 
 
  

     


         
Template Sequence  SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP
Template Known Secondary structure 


SS

S

TTTTTTTTTTTTTTSTTT
SS

Template Predicted Secondary structure 
















Template SS confidence 





















































   27..30.........40.........50.........60.........70.........80
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions