Job Description P45848 Confidence 19.74% Date Thu Jan 5 12:03:51 GMT 2012 Rank 13 Aligned Residues 170 % Identity 12% Template c3se6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 2; PDBTitle: crystal structure of the human endoplasmic reticulum aminopeptidase 2 Resolution 3.08 Å

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		36	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		S	L	F	D	V	E	A	T	L	Q	.	P	D	G	V	L	D	I	K	E	N	I	H	F	Q	A	R	N	Q	Q	I	K	H	G	F	Y	R	D	L	P	R	L	W	M	Q	P	D	G	D	A	A	L	L	N	Y	H	I	V	G	V	T	R	D	G	I	P	E	P	W	H	L	D	W	H	I	G	L	M	S	I
Query Conservation												.
Alig confidence												.																			.	.									.	.	.	.	.	.
Template Conservation																															.	.									.	.	.	.	.	.
Template Sequence		L	H	Y	D	L	F	V	H	P	N	L	T	S	L	D	F	V	A	S	E	K	I	E	V	L	V	S	N	A	.	.	T	Q	F	I	I	L	H	S	.	.	.	.	.	.	K	D	L	E	I	T	N	A	T	L	Q	S	E	E	Y	M	K	P	G	K	E	L	K	V	L	S	Y	P	A	H	E	Q	I	A	L
Template Known Secondary structure												T	T	T	T													S	S		.	.		S							.	.	.	.	.	.	S	S															S	S										G	G	G	T
Template Predicted Secondary structure																															.	.									.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.													.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	G	D	K	Q	R	F	L	P	Q	G	D	Y	H	Y	Q	I	H	Y	Q	V	K	N	A	.	.	.	.	.	.	.	.	F	L	R	E	G	D	S	D	L	L	I	W	N	V	T	G	N	H	.	.	.	.	.	.	.	.	.	.	.	.	W	P	F	E	I	Y	K	T	R	F	S	L	Q	F	S	N	I
Query Conservation																											.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																	.	.	.	.	.	.	.	.																.			.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation									.	.																																								.																													.	.	.
Template Sequence		L	V	P	E	K	L	T	.	.	P	H	L	K	Y	Y	V	A	M	D	F	Q	A	K	L	G	D	G	F	E	G	F	Y	K	S	T	Y	R	T	L	G	G	E	T	R	I	L	A	V	.	T	D	F	E	P	T	Q	A	R	M	A	F	P	C	F	D	E	P	L	F	K	A	N	F	S	I	K	I	.	.	.
Template Known Secondary structure				S	S				.	.	T	T														B	S	S	S	S										T	T	S								.				T	T	T	T	G	G	G	T	S		B			S	T	T			B							.	.	.
Template Predicted Secondary structure									.	.																																								.																													.	.	.
Template SS confidence
		151	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	N	P	F	S	E	I	D	L	F	T	G	E	E	G	D	T	Y	R	N	G	R	I	L	E	D	G	R	I	E	S	R	D	P	F	Y	R	E	D	F	T	V	L	Y	R
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	R	R	E	S	R	H	I	A	L	S	N	M	P	K	V	K	T	I	E	L	E	G	G	L	L	E	D	H	F	E	T	T	V	K	M	S	T	Y	L	V	A	Y	I	V	C
Template Known Secondary structure		.				T	T						S	S									T	T	S											S	B		G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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