Job Description P45848 Confidence 6.24% Date Thu Jan 5 12:03:51 GMT 2012 Rank 41 Aligned Residues 47 % Identity 9% Template c3pa8A_ PDB info PDB header:toxin/peptide inhibitor Chain: A: PDB Molecule:toxin b; PDBTitle: structure of the c. difficile tcdb cysteine protease domain in complex2 with a peptide inhibitor Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	L	D	W	H	I	G	L	M	S	I	V	V	G	D	K	Q	R	F	L	P	Q	G	D	Y	H	Y	Q	I	H	Y	Q	V	K	N	A	F	L	R	E	G	D	S	D	L	L	I	W	N	V	T	G	N	H
Query Conservation
Alig confidence																				.	.	.	.	.																	.	.	.
Template Conservation																				.	.	.	.	.																	.	.	.
Template Sequence		F	Q	K	N	I	E	D	S	E	I	A	Y	Y	Y	N	P	G	D	.	.	.	.	.	G	E	I	Q	E	I	D	K	Y	K	I	P	S	I	I	S	.	.	.	D	R	P	K	I	K	L	T	F	I	G	H	G
Template Known Secondary structure				T	T	S	T	T									T	T	T	.	.	.	.	.	T							T	T				T	T	T	T	.	.	.	T		S
Template Predicted Secondary structure																				.	.	.	.	.																	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions